RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TNK2Q07912 1038 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 UBXN2BQ14CS0 331 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 EML3Q32P44 896 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 FIGNQ5HY92 759 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 TRIM68Q6AZZ1 485 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 OR6B2Q6IFH4 312 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 TRIM72Q6ZMU5 477 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 MIB1Q86YT6 1006 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 PASD1Q8IV76 773 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 TTC8Q8TAM2 541 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 EPS8L1Q8TE68 723 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 DDX1Q92499 740 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 EDEM1Q92611 657 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 FAM149B1Q96BN6 582 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 C18orf8Q96DM3 657 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 PRRX2Q99811 253 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 NUCKS1Q9H1E3 243 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 HPS4Q9NQG7 708 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 ASNSD1Q9NWL6 643 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 IFNKQ9P0W0 207 aa9.29□□□□□ -0.92
COL8A1-203ENST00000452013 HBS1LQ9Y450 684 aaKnown RBP9.29□□□□□ -0.92
COL8A1-203ENST00000452013 SPTBN5Q9NRC6 3674 aaKnown RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 MDM4O15151 490 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 PAPSS1O43252 624 aaPredicted RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 ADH1CP00326 375 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 PTMAP06454 111 aaKnown RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 MMEP08473 750 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 ARSAP15289 507 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 TNFAIP3P21580 790 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 CD72P21854 359 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 GBP1P32455 592 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 CHKAP35790 457 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 MAGEA9P43362 315 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 GABRB2P47870 512 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 SLC6A3Q01959 620 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 GAD2Q05329 585 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 DHCR24Q15392 516 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 PREPLQ4J6C6 727 aaPredicted RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 DGKKQ5KSL6 1271 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 IER5LQ5T953 404 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 SFMBT2Q5VUG0 894 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 PPP1R2P3Q6NXS1 205 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 TOGARAM2Q6ZUX3 1019 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 BHLHA9Q7RTU4 235 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 UNC45BQ8IWX7 931 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 RNF214Q8ND24 703 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 C1orf131Q8NDD1 294 aaKnown RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 CCDC26Q8TAB7 109 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 RIN3Q8TB24 985 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 PLD4Q96BZ4 506 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 AGPAT1Q99943 283 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 KCNH6Q9H252 994 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 LMAN1LQ9HAT1 526 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 POPDC2Q9HBU9 364 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 LTB4R2Q9NPC1 389 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 TMEM51Q9NW97 253 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 WDR35Q9P2L0 1181 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 CYTH4Q9UIA0 394 aa9.28□□□□□ -0.92
COL8A1-203ENST00000452013 NOCTQ9UK39 431 aaKnown RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 MTCL1Q9Y4B5 1905 aaKnown RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 TCF20Q9UGU0 1960 aaKnown RBP9.28□□□□□ -0.92
COL8A1-203ENST00000452013 UNC80Q8N2C7 3258 aa9.27□□□□□ -0.92
COL8A1-203ENST00000452013 A0A1W2PQJ5 194 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 TRDMT1O14717 391 aaKnown RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 PI15O43692 258 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 HSF2BPO75031 334 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 STC2O76061 302 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 CYP1A1P04798 512 aaPredicted RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 HMBSP08397 361 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 CHRNB2P17787 502 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 CTHP32929 405 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 GJA4P35212 333 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 GALK1P51570 392 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 CDK17Q00537 523 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 GRSF1Q12849 480 aaKnown RBP eCLIP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 LRRC32Q14392 662 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 ASIC2Q16515 512 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 MSANTD2Q6P1R3 559 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 RHBDF2Q6PJF5 856 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 IRF2BP2Q7Z5L9 587 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 BBS7Q8IWZ6 715 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 SYNPOQ8N3V7 929 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 PJA1Q8NG27 643 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 CPA5Q8WXQ8 436 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 BAP1Q92560 729 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 SERPINB11Q96P15 392 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 P2RY13Q9BPV8 354 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 FOXQ1Q9C009 403 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 XPO4Q9C0E2 1151 aaKnown RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 SPHK2Q9NRA0 654 aa9.27□□□□□ -0.93
COL8A1-203ENST00000452013 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.93
COL8A1-203ENST00000452013 RRN3Q9NYV6 651 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms