RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 BSPRYQ5W0U4 402 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 TAS1R1Q7RTX1 841 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SCN4BQ8IWT1 228 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 CCDC185Q8N715 623 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SLC35B2Q8TB61 432 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SLC7A14Q8TBB6 771 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 FAF2Q96CS3 445 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 IGSF21Q96ID5 467 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SLC9A7Q96T83 725 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 RC3H2Q9HBD1 1191 aaKnown RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 AP4E1Q9UPM8 1137 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 NEU2Q9Y3R4 380 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 COL4A4P53420 1690 aaPredicted RBP14.84□□□□□ -0.03
USP39-207ENST00000450066 BAIAP3O94812 1187 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 ITGAVP06756 1048 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 DEFB103AP81534 67 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 USP41Q3LFD5 358 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 ANKRD20A8PQ5CZ79 823 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 FAM131BQ86XD5 332 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 RNF168Q8IYW5 571 aaPredicted RBP14.84□□□□□ -0.03
USP39-207ENST00000450066 MREGQ8N565 214 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 HAUS1Q96CS2 278 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 FAM129AQ9BZQ8 928 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 NEUROG2Q9H2A3 272 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 PIGVQ9NUD9 493 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 ZDHHC18Q9NUE0 388 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 GRHL1Q9NZI5 618 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 FZD10Q9ULW2 581 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 ZNF148Q9UQR1 794 aa14.84□□□□□ -0.03
USP39-207ENST00000450066 F9P00740 461 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 CPB1P15086 417 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 AIF1P55008 147 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 OTUD4Q01804 1114 aaKnown RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 NME3Q13232 169 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 PPP6R3Q5H9R7 873 aaPredicted RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 KCNT2Q6UVM3 1135 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 RSPO2Q6UXX9 243 aaPredicted RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 ZNF365Q70YC5 407 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 UBE2Q1Q7Z7E8 422 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 CCDC89Q8N998 374 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 SPPL2BQ8TCT7 592 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 C2orf15Q8WU43 125 aaKnown RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 PGLYRP2Q96PD5 576 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 DHX35Q9H5Z1 703 aaKnown RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 MTMR10Q9NXD2 777 aa14.83□□□□□ -0.03
USP39-207ENST00000450066 SAE1Q9UBE0 346 aaPredicted RBP14.83□□□□□ -0.03
USP39-207ENST00000450066 CARNS1A5YM72 827 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 DDR2Q16832 855 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 SLC9A4Q6AI14 798 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 GSTA5Q7RTV2 222 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 CMTR2Q8IYT2 770 aaKnown RBP14.83□□□□□ -0.04
USP39-207ENST00000450066 NUP93Q8N1F7 819 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 ALLCQ8N6M5 410 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 ATAD1Q8NBU5 361 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 CCHCR1Q8TD31 782 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 EDEM1Q92611 657 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 IL23AQ9NPF7 189 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 OGFRQ9NZT2 677 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 WHRNQ9P202 907 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 RCOR3Q9P2K3 495 aaPredicted RBP14.83□□□□□ -0.04
USP39-207ENST00000450066 ASIC3Q9UHC3 531 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 HPCAL4Q9UM19 191 aa14.83□□□□□ -0.04
USP39-207ENST00000450066 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 MTMR11A4FU01 709 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ACRP10323 421 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ITIH2P19823 946 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 IVDP26440 423 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 KLRC2P26717 231 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 PLTPP55058 493 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ARPP19P56211 112 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 YWHAGP61981 247 aaKnown RBP eCLIP14.82□□□□□ -0.04
USP39-207ENST00000450066 SPOUT1Q5T280 376 aaKnown RBP14.82□□□□□ -0.04
USP39-207ENST00000450066 SLC8B1Q6J4K2 584 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ZDHHC24Q6UX98 284 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 TMCO2Q7Z6W1 182 aaPredicted RBP14.82□□□□□ -0.04
USP39-207ENST00000450066 PQLC3Q8N755 202 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 PLD5Q8N7P1 536 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 PCDH19Q8TAB3 1148 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ADAM32Q8TC27 787 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 P3H4Q92791 437 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ART4Q93070 314 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 NTAN1Q96AB6 310 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ZNF558Q96NG5 402 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 KCTD15Q96SI1 283 aaPredicted RBP14.82□□□□□ -0.04
USP39-207ENST00000450066 FMO2Q99518 471 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 VN1R3Q9BXE9 311 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 ACBD3Q9H3P7 528 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 FBXO44Q9H4M3 255 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 WDR6Q9NNW5 1121 aaKnown RBP14.82□□□□□ -0.04
USP39-207ENST00000450066 ABCC13Q9NSE7 274 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 DDIT4Q9NX09 232 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 MTRRQ9UBK8 725 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 SCML2Q9UQR0 700 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 BACE2Q9Y5Z0 518 aa14.82□□□□□ -0.04
USP39-207ENST00000450066 PECAM1P16284 738 aaPredicted RBP14.81□□□□□ -0.04
USP39-207ENST00000450066 TGM2P21980 687 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 HSPA9P38646 679 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms