RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ALG3Q92685 438 aa10.73□□□□□ -0.69
CTC1-202ENST00000449476 TUBGCP3Q96CW5 907 aa10.73□□□□□ -0.69
CTC1-202ENST00000449476 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
CTC1-202ENST00000449476 SYT15Q9BQS2 421 aa10.73□□□□□ -0.69
CTC1-202ENST00000449476 PRDM5Q9NQX1 630 aaPredicted RBP10.73□□□□□ -0.69
CTC1-202ENST00000449476 PIH1D1Q9NWS0 290 aaKnown RBP10.73□□□□□ -0.69
CTC1-202ENST00000449476 VAV3Q9UKW4 847 aa10.73□□□□□ -0.69
CTC1-202ENST00000449476 TPST1O60507 370 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 NPM3O75607 178 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 SOAT2O75908 522 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 FAAP100Q0VG06 881 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 EFL1Q7Z2Z2 1120 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 ZDHHC17Q8IUH5 632 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 HASPINQ8TF76 798 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 ZNF75CPQ92670 426 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 CCDC126Q96EE4 140 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 THAP11Q96EK4 314 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 APOPT1Q96IL0 206 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 LRRC19Q9H756 370 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 CASZ1Q86V15 1759 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 KRT16P08779 473 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 MAP4P27816 1152 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 RBL1P28749 1068 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 GP5P40197 560 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 POU4F1Q01851 419 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 SLC6A3Q01959 620 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 ITGA9Q13797 1035 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 DPYSL3Q14195 570 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 SHROOM1Q2M3G4 852 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 HGSNATQ68CP4 663 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 DNAJB3Q8WWF6 145 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 NAF1Q96HR8 494 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 CINPQ9BW66 212 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 DTNAQ9Y4J8 743 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 ROBO3Q96MS0 1386 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 PLSCR1O15162 318 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 HSPA1AP0DMV8 641 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 HSPA1BP0DMV9 641 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 ETS1P14921 441 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 KBTBD12Q3ZCT8 623 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 SGO1Q5FBB7 561 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 SLC2A14Q8TDB8 520 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 CYGBQ8WWM9 190 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 FBXO32Q969P5 355 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 CELF6Q96J87 481 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 FICDQ9BVA6 458 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 APOL5Q9BWW9 433 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 GPBP1L1Q9HC44 474 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 TCHHQ07283 1943 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 MON2Q7Z3U7 1717 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 CASTOR2A6NHX0 329 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 FCHO1O14526 889 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 H2AFYO75367 372 aaKnown RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 TFE3P19532 575 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 NUMBP49757 651 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 HDAC4P56524 1084 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 AASDHQ4L235 1098 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 C9orf131Q5VYM1 1079 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 CNDP1Q96KN2 507 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 HSD3B7Q9H2F3 369 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 RBM22Q9NW64 420 aaKnown RBP eCLIP10.72□□□□□ -0.69
CTC1-202ENST00000449476 IRAK4Q9NWZ3 460 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 NCKIPSDQ9NZQ3 722 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.72□□□□□ -0.69
CTC1-202ENST00000449476 CACNA1FO60840 1977 aa10.72□□□□□ -0.69
CTC1-202ENST00000449476 UBR1Q8IWV7 1749 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 SIGLEC16A6NMB1 481 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 EPHX2P34913 555 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 SLC11A2P49281 568 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 LRRC38Q5VT99 294 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 NT5DC4Q86YG4 428 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 OR5B17Q8NGF7 314 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 FAM136AQ96C01 138 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 FAR2Q96K12 515 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 RBAK-RBAKDNI3L0D1 243 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 STRNO43815 780 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 CLASP2O75122 1294 aaKnown RBP10.71□□□□□ -0.69
CTC1-202ENST00000449476 TPH1P17752 444 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 MGAT1P26572 445 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 DSG1Q02413 1049 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 CNGA2Q16280 664 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 KCTD19Q17RG1 926 aaPredicted RBP10.71□□□□□ -0.69
CTC1-202ENST00000449476 PACS2Q86VP3 889 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 IQCKQ8N0W5 287 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 KAT2BQ92831 832 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 BHMTQ93088 406 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 CENPTQ96BT3 561 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 TMEM237Q96Q45 408 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 DYRK4Q9NR20 520 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
CTC1-202ENST00000449476 TRMT6Q9UJA5 497 aaKnown RBP10.71□□□□□ -0.69
CTC1-202ENST00000449476 DRG1Q9Y295 367 aaKnown RBP10.71□□□□□ -0.69
CTC1-202ENST00000449476 ASTN2O75129 1339 aaPredicted RBP10.71□□□□□ -0.7
CTC1-202ENST00000449476 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.7
CTC1-202ENST00000449476 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms