RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 XYLBO75191 536 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 ATP1A1P05023 1023 aaKnown RBP15.27■□□□□ 0.03
TNF-208ENST00000449264 HNRNPA1P09651 372 aaKnown RBP eCLIP15.27■□□□□ 0.03
TNF-208ENST00000449264 RALAP11233 206 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 MYL4P12829 197 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 TCF4P15884 667 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 GABRR2P28476 465 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 HOXA9P31269 272 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 SLC1A1P43005 524 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 ATXN1P54253 815 aaKnown RBP15.27■□□□□ 0.03
TNF-208ENST00000449264 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.03
TNF-208ENST00000449264 RTL10Q7L3V2 364 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 TMC8Q8IU68 726 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 C12orf76Q8N812 135 aaPredicted RBP15.27■□□□□ 0.03
TNF-208ENST00000449264 OVCA2Q8WZ82 227 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 CASP10Q92851 521 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 PSMB7Q99436 277 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 NPY6RQ99463 290 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 CCSER2Q9H7U1 834 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.27■□□□□ 0.03
TNF-208ENST00000449264 DDIT4Q9NX09 232 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 ZDHHC7Q9NXF8 308 aa15.27■□□□□ 0.03
TNF-208ENST00000449264 CCDC195A0A1B0GUA6 201 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 CTAGE9A4FU28 777 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 MDM4O15151 490 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 LINC01565O15544 149 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 TLR5O60602 858 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
TNF-208ENST00000449264 ZDHHC11BP0C7U3 371 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 IGFBP4P22692 258 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 MARCKSL1P49006 195 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 TAS2R40P59535 323 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 EFEMP1Q12805 493 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 C10orf120Q5SQS8 335 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 SCYL2Q6P3W7 929 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 MICALL1Q8N3F8 863 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 ARFGAP1Q8N6T3 406 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 GCNAQ96QF7 691 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 NACA2Q9H009 215 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 SFXN1Q9H9B4 322 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 TRPC7Q9HCX4 862 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 CLIC5Q9NZA1 410 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 PCSK1NQ9UHG2 260 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
TNF-208ENST00000449264 MSI1O43347 362 aaKnown RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 GLP2RO95838 553 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 TBX18O95935 607 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 MIPP30301 263 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 RDXP35241 583 aaKnown RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 HDAC4P56524 1084 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 CYP4F8P98187 520 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 DEUP1Q05D60 604 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 KCNC3Q14003 757 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 ADGRE1Q14246 886 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 ACAP1Q15027 740 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 RPS6KA1Q15418 735 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 SMTNL2Q2TAL5 461 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 ZFYVE27Q5T4F4 411 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 TMC5Q6UXY8 1006 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 BEND5Q7L4P6 421 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 STRADAQ7RTN6 431 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 FAM131BQ86XD5 332 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 KRT35Q92764 455 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 NT5C3BQ969T7 300 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 APOL5Q9BWW9 433 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 TLR10Q9BXR5 811 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 LRRC3Q9BY71 257 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 PRKD2Q9BZL6 878 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 ZWILCHQ9H900 591 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 IL21Q9HBE4 155 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 DZANK1Q9NVP4 752 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 RRN3Q9NYV6 651 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 RASAL2Q9UJF2 1139 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 BRWD1Q9NSI6 2320 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 NOTCH4Q99466 2003 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 A0A1W2PRU2 124 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 F11P03951 625 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 SRGAP2BP0DMP2 458 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 GJA1P17302 382 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 PTPN2P17706 415 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 RARS2Q5T160 578 aaKnown RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 HECTD3Q5T447 861 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 EP400NLQ6ZTU2 488 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 GAREM2Q75VX8 874 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 PDZD4Q76G19 769 aaPredicted RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 GRASPQ7Z6J2 395 aaPredicted RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 MIB1Q86YT6 1006 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 EFHBQ8N7U6 833 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 SMG7Q92540 1137 aaKnown RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 CENPIQ92674 756 aaPredicted RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 CD101Q93033 1021 aa15.25■□□□□ 0.03
TNF-208ENST00000449264 ZNF707Q96C28 371 aaPredicted RBP15.25■□□□□ 0.03
TNF-208ENST00000449264 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms