RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CYP4V2Q6ZWL3 525 aaPredicted RBP20.11■□□□□ 0.81
RPS28-202ENST00000449223 ALG3Q92685 438 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 CDK5RAP1Q96SZ6 601 aaKnown RBP20.11■□□□□ 0.81
RPS28-202ENST00000449223 L2HGDHQ9H9P8 463 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 MAN1C1Q9NR34 630 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 OLA1Q9NTK5 396 aaKnown RBP20.11■□□□□ 0.81
RPS28-202ENST00000449223 CALCOCO1Q9P1Z2 691 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 USP18Q9UMW8 372 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 USTQ9Y2C2 406 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 HCFC2Q9Y5Z7 792 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 KRT7P08729 469 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 TCF4P15884 667 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 RDXP35241 583 aaKnown RBP20.1■□□□□ 0.81
RPS28-202ENST00000449223 MARCKSL1P49006 195 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 SULT1E1P49888 294 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 TUBP50607 506 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 PITX1P78337 314 aaPredicted RBP20.1■□□□□ 0.81
RPS28-202ENST00000449223 NNTQ13423 1086 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 CDO1Q16878 200 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 KLHDC10Q6PID8 442 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 ELMSAN1Q6PJG2 1045 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 KATNAL2Q8IYT4 538 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 DQX1Q8TE96 717 aaKnown RBP20.1■□□□□ 0.81
RPS28-202ENST00000449223 TEKT4Q8WW24 435 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 EDEM1Q92611 657 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 PBKQ96KB5 322 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 LRRC3Q9BY71 257 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 ZDHHC7Q9NXF8 308 aa20.1■□□□□ 0.81
RPS28-202ENST00000449223 MAGED2Q9UNF1 606 aaPredicted RBP20.1■□□□□ 0.81
RPS28-202ENST00000449223 TADA3O75528 432 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 CSPG5O95196 566 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 TRUB2O95900 331 aaKnown RBP20.09■□□□□ 0.81
RPS28-202ENST00000449223 EPCAMP16422 314 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 IL1R2P27930 398 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 RWDD2BP57060 319 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 DCAF12L1Q5VU92 463 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 TMC8Q8IU68 726 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 ZNF576Q9H609 170 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 IL21Q9HBE4 155 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 WDR6Q9NNW5 1121 aaKnown RBP20.09■□□□□ 0.81
RPS28-202ENST00000449223 DDX56Q9NY93 547 aaKnown RBP20.09■□□□□ 0.81
RPS28-202ENST00000449223 LMCD1Q9NZU5 365 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 CDC23Q9UJX2 597 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 MRFAP1Q9Y605 127 aa20.09■□□□□ 0.81
RPS28-202ENST00000449223 ZNF840PA6NDX5 716 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 M0QYT0 321 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 MDM4O15151 490 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
RPS28-202ENST00000449223 RALAP11233 206 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 EPHA5P54756 1037 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 AIF1P55008 147 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 RAB6CQ53S08 254 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 BOLA3Q53S33 107 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 PPM1LQ5SGD2 360 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 TMEM150AQ86TG1 271 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 PSTKQ8IV42 348 aaKnown RBP20.08■□□□□ 0.81
RPS28-202ENST00000449223 ELMOD1Q8N336 334 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 PPP2R3CQ969Q6 453 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 NTAN1Q96AB6 310 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 SERPINB11Q96P15 392 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 PEBP4Q96S96 227 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 RAB6CQ9H0N0 254 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 TLE6Q9H808 572 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 PIGVQ9NUD9 493 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 TRPM5Q9NZQ8 1165 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 RNF14Q9UBS8 474 aa20.08■□□□□ 0.81
RPS28-202ENST00000449223 TTC7AQ9ULT0 858 aaPredicted RBP20.08■□□□□ 0.81
RPS28-202ENST00000449223 MYO9BQ13459 2157 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 KCNK3O14649 394 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 IRAK2O43187 625 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 PRPSAP2O60256 369 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 F11P03951 625 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 RARGP13631 454 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 DEUP1Q05D60 604 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 TAF12Q16514 161 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 PABPC1LQ4VXU2 614 aaKnown RBP20.07■□□□□ 0.8
RPS28-202ENST00000449223 TXNRD3NBQ6F5E7 133 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 TAC4Q86UU9 113 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 RASGEF1CQ8N431 466 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 EXD1Q8NHP7 514 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 RNF139Q8WU17 664 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 ZNF512Q96ME7 567 aaPredicted RBP20.07■□□□□ 0.8
RPS28-202ENST00000449223 DDIT4Q9NX09 232 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 PER2O15055 1255 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 TLR5O60602 858 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 GBP1P32455 592 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 CXCR3P49682 368 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 SCAPQ12770 1279 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 TADA2BQ86TJ2 420 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 VSIG1Q86XK7 387 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 CREG2Q8IUH2 290 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 LEMD2Q8NC56 503 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 CMASQ8NFW8 434 aaPredicted RBP20.07■□□□□ 0.8
RPS28-202ENST00000449223 FAM71BQ8TC56 605 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 COG1Q8WTW3 980 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 CASP10Q92851 521 aa20.07■□□□□ 0.8
RPS28-202ENST00000449223 ZNF334Q9HCZ1 680 aaPredicted RBP20.07■□□□□ 0.8
RPS28-202ENST00000449223 TRIOBPQ9H2D6 2365 aa20.06■□□□□ 0.8
RPS28-202ENST00000449223 SRGAP2O75044 1071 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms