RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CAPSQ13938 189 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 DPYSL3Q14195 570 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 MGAT5BQ3V5L5 792 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 C16orf89Q6UX73 402 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CHSY1Q86X52 802 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CALML6Q8TD86 181 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 OPTNQ96CV9 577 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 NAF1Q96HR8 494 aaKnown RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 OLFM3Q96PB7 478 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 GCNAQ96QF7 691 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SEPT5Q99719 369 aaPredicted RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 DDX50Q9BQ39 737 aaKnown RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 MYLK2Q9H1R3 596 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 TMEM134Q9H6X4 195 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 DCLRE1BQ9H816 532 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CHST12Q9NRB3 414 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 IRAK4Q9NWZ3 460 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 IGKV6D-41A0A0C4DH26 115 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 ADM5C9JUS6 153 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 DDX3YO15523 660 aaKnown RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 LIASO43766 372 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 TBC1D12O60347 775 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 ANXA9O76027 345 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CALB2P22676 271 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 HUNKP57058 714 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 TMEM132BQ14DG7 1078 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 GRIK4Q16099 956 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 KBTBD12Q3ZCT8 623 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 LRRC23Q53EV4 343 aaPredicted RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 C6orf10Q5SRN2 563 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SLC30A9Q6PML9 568 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 KCNT2Q6UVM3 1135 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CES3Q6UWW8 571 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CATSPERGQ6ZRH7 1159 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 ZCCHC23Q6ZST2 131 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 LINC00523Q86TU6 105 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SCUBE1Q8IWY4 988 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 RASGEF1CQ8N431 466 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 POU5F2Q8N7G0 328 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SHCBP1Q8NEM2 672 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SPDYE1Q8NFV5 336 aaPredicted RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 TEKT4Q8WW24 435 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 CENPTQ96BT3 561 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 ZNF512Q96ME7 567 aaPredicted RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 TBCBQ99426 244 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 FHDC1Q9C0D6 1143 aaPredicted RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 TSPYL2Q9H2G4 693 aaPredicted RBP7.38□□□□□ -1.23
BEST1-202ENST00000449131 IL1RL2Q9HB29 575 aa7.38□□□□□ -1.23
BEST1-202ENST00000449131 SIGLEC16A6NMB1 481 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 M0R2N6 131 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 FCHO1O14526 889 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 F9P00740 461 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 SETSIPP0DME0 302 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 CPA3P15088 417 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 EEF1DP29692 281 aaKnown RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 RPA3P35244 121 aaPredicted RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 SERPINB5P36952 375 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 CPT1AP50416 773 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 MRPS35P82673 323 aaKnown RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 MGAT5Q09328 741 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 ADIGQ0VDE8 80 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 MPP3Q13368 585 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 POTEAQ6S8J7 498 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 NPNTQ6UXI9 565 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 EFCAB3Q8N7B9 438 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 LRRC57Q8N9N7 239 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 NETO2Q8NC67 525 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 ADAM32Q8TC27 787 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 HASPINQ8TF76 798 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 EDEM1Q92611 657 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 MIEF2Q96C03 454 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 ARHGAP26Q9UNA1 814 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 COG5Q9UP83 839 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 RUVBL2Q9Y230 463 aaKnown RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 C15orf41Q9Y2V0 281 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 IGLV3-22A0A075B6J6 115 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 C2orf71A6NGG8 1288 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 E9PBE3 544 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 AKAP10O43572 662 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 TIMM44O43615 452 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 KLHL41O60662 606 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 LYPLA2O95372 231 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 NFICP08651 508 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 TPH1P17752 444 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 SERPINB3P29508 390 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 RPL22P35268 128 aaKnown RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 LBRQ14739 615 aaKnown RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 RNF219Q5W0B1 726 aaPredicted RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 MIB1Q86YT6 1006 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 C12orf56Q8IXR9 622 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 DCP1BQ8IZD4 617 aaKnown RBP7.37□□□□□ -1.23
BEST1-202ENST00000449131 DEFB106AQ8N104 65 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 ARHGAP18Q8N392 663 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 RNF148Q8N7C7 305 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 CATSPER1Q8NEC5 780 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 DNAJB3Q8WWF6 145 aa7.37□□□□□ -1.23
BEST1-202ENST00000449131 CELF6Q96J87 481 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms