RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 GUCA1BQ9UMX6 200 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 USP27XA6NNY8 438 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 SOBPA7XYQ1 873 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 MOSPD3O75425 235 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 DESP17661 470 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 PSMA2P25787 234 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 DDX6P26196 483 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHANK2-210ENST00000449116 PTPN9P43378 593 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 CYP4F8P98187 520 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 OGDHQ02218 1023 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 CCDC85BQ15834 202 aaPredicted RBP15.29■□□□□ 0.04
SHANK2-210ENST00000449116 SLC5A9Q2M3M2 681 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 SLC25A52Q3SY17 297 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 CCDC14Q49A88 953 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 ARHGAP15Q53QZ3 475 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 ATAT1Q5SQI0 421 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 KLHDC10Q6PID8 442 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 DQX1Q8TE96 717 aaKnown RBP15.29■□□□□ 0.04
SHANK2-210ENST00000449116 TCEAL4Q96EI5 215 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 BTBD6Q96KE9 485 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 CFAP57Q96MR6 1250 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 CCSER2Q9H7U1 834 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
SHANK2-210ENST00000449116 MRPS23Q9Y3D9 190 aaKnown RBP15.29■□□□□ 0.04
SHANK2-210ENST00000449116 PAXBP1Q9Y5B6 917 aa15.29■□□□□ 0.04
SHANK2-210ENST00000449116 CLUHO75153 1309 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 NRG2O14511 850 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-210ENST00000449116 OAS1P00973 400 aaKnown RBP15.28■□□□□ 0.04
SHANK2-210ENST00000449116 GJA1P17302 382 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 PFKLP17858 780 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 ATP5C1P36542 298 aaKnown RBP15.28■□□□□ 0.04
SHANK2-210ENST00000449116 SULT1E1P49888 294 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 PIGHQ14442 188 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-210ENST00000449116 SKIV2LQ15477 1246 aaKnown RBP15.28■□□□□ 0.04
SHANK2-210ENST00000449116 TEAD2Q15562 447 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 C10orf120Q5SQS8 335 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 TXNDC8Q6A555 127 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 MSANTD2Q6P1R3 559 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 TPCN2Q8NHX9 752 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 NT5C3BQ969T7 300 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 RIPOR3Q96MK2 946 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 NPY6RQ99463 290 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 CNPY3Q9BT09 278 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 NACA2Q9H009 215 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 SMOC2Q9H3U7 446 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 TRPC7Q9HCX4 862 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 CD207Q9UJ71 328 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 ZMYM5Q9UJ78 669 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 NUDT5Q9UKK9 219 aa15.28■□□□□ 0.04
SHANK2-210ENST00000449116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 C2orf78A6NCI8 922 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 COCHO43405 550 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 PROSCO94903 275 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 MOCS3O95396 460 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 OLFM2O95897 454 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 TRUB2O95900 331 aaKnown RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 TBX18O95935 607 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 FSHRP23945 695 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 GBP1P32455 592 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 MAN1A1P33908 653 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 MTHFRP42898 656 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 ATP11AP98196 1134 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 ZNF252P-AS1Q0IIN9 211 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 EFEMP1Q12805 493 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 MESDQ14696 234 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 ACAP1Q15027 740 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 C15orf59Q2T9L4 293 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 GPR158Q5T848 1215 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 C11orf63Q6NUN7 778 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 TAC4Q86UU9 113 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 C17orf53Q8N3J3 647 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 NIPA2Q8N8Q9 360 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 SMRP1Q8NCR6 262 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 ITFG1Q8TB96 612 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 PPM1EQ8WY54 764 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 CENPIQ92674 756 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 PGAP3Q96FM1 320 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 SERPINB11Q96P15 392 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 TBCBQ99426 244 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 TASP1Q9H6P5 420 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 UBE2ZQ9H832 354 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-210ENST00000449116 FAM204AQ9H8W3 233 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 CDH22Q9UJ99 828 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 DNMT3LQ9UJW3 386 aa15.27■□□□□ 0.04
SHANK2-210ENST00000449116 NOTCH4Q99466 2003 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 TRAV19A0A0A6YYK7 116 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 M0QYT0 321 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 MDM4O15151 490 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-210ENST00000449116 ENDOD1O94919 500 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 IGLV3-25P01717 112 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 CEBPBP17676 345 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 HDCP19113 662 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 RDXP35241 583 aaKnown RBP15.26■□□□□ 0.03
SHANK2-210ENST00000449116 PITX1P78337 314 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-210ENST00000449116 CLUL1Q15846 466 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 CDO1Q16878 200 aa15.26■□□□□ 0.03
SHANK2-210ENST00000449116 STXBP5Q5T5C0 1151 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms