RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ZNF12P17014 697 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 RAB27AP51159 221 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ROR1Q01973 937 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 HMBOX1Q6NT76 420 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ZNF662Q6ZS27 426 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 DHRSXQ8N5I4 330 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ATG4AQ8WYN0 398 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 FAM111AQ96PZ2 611 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 KIFC1Q9BW19 673 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 NUP188Q5SRE5 1749 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SRRM3A6NNA2 597 aaPredicted RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 APOL1O14791 398 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 CBX6O95503 412 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 IFNA16P05015 189 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SP100P23497 879 aaPredicted RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 SERPINB5P36952 375 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 CRKP46108 304 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 IREB2P48200 963 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 PSEN1P49768 467 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 KCNJ2P63252 427 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 C1DQ13901 141 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 DGKKQ5KSL6 1271 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 PPP1R15BQ5SWA1 713 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 CDC42EP5Q6NZY7 148 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 C3orf62Q6ZUJ4 267 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■■■■■ 163.7
SMC6-207ENST00000448223 NDUFAF2Q8N183 169 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 PROX1Q92786 737 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ATXN7L3BQ96GX2 97 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 C17orf80Q9BSJ5 609 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 DGCR6LQ9BY27 220 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 INTS2Q9H0H0 1204 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 MYLK2Q9H1R3 596 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 TPRKBQ9Y3C4 175 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 NR2E1Q9Y466 385 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 PDLIM1O00151 329 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 CCRL2O00421 344 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 GAS2O43903 313 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 FGRP09769 529 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 AQP5P55064 265 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 TBCELQ5QJ74 424 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ASB12Q8WXK4 309 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SH3KBP1Q96B97 665 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ACAT2Q9BWD1 397 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ZNF624Q9P2J8 865 aaPredicted RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 ZC3H7BQ9UGR2 993 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 ZNF222Q9UK12 451 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 GPR75-ASB3A0A0A6YYF3 556 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 CLDN3O15551 220 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 NDUFB5O43674 189 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 GUCA1CO95843 209 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 GEMIN4P57678 1058 aaKnown RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 ACTR2P61160 394 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 GRSF1Q12849 480 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMC6-207ENST00000448223 SNX17Q15036 470 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ECSITQ9BQ95 431 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 PI4K2AQ9BTU6 479 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 LRMDAQ9H2I8 198 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 PPP2R3BQ9Y5P8 575 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ALG6Q9Y672 507 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 SPATA31A1Q5TZJ5 1347 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 SHOX2O60902 331 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 USP12O75317 370 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 NDUFB10O96000 172 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 IFI35P80217 286 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 KIAA0408Q6ZU52 694 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 DNAJC19Q96DA6 116 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ZC3H10Q96K80 434 aaKnown RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 TUBGCP5Q96RT8 1024 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 TRPC5OSA6NMA1 111 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 PTGES3LE9PB15 166 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 FAM20BO75063 409 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 MYO1DO94832 1006 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ATP6V1B2P21281 511 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ITGA8P53708 1063 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ZBTB8OSQ8IWT0 167 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 MTMR9Q96QG7 549 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 SEMA4AQ9H3S1 761 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 NGRNQ9NPE2 291 aaKnown RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 AVENQ9NQS1 362 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 SLC12A6Q9UHW9 1150 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 PARP4Q9UKK3 1724 aaKnown RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 TK2O00142 265 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.892e-8■■■■□ 24.4
SMC6-207ENST00000448223 HUS1O60921 280 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 UNC5CO95185 931 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 SHBGP04278 402 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 ZNF844Q08AG5 666 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 GIT2Q14161 759 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 RBBP7Q16576 425 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 TCHHL1Q5QJ38 904 aaPredicted RBP9.48□□□□□ -0.89
SMC6-207ENST00000448223 HGSNATQ68CP4 663 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 SULT1C3Q6IMI6 304 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 OR8H1Q8NGG4 311 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
SMC6-207ENST00000448223 KAT5Q92993 513 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms