RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 CBX6O95503 412 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 HGFP14210 728 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 HDCP19113 662 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 ZNF132P52740 706 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 PDX1P52945 283 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 PER3P56645 1201 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 FOXD4Q12950 439 aaPredicted RBP7.74□□□□□ -1.17
SSXP3-201ENST00000442971 KCNB1Q14721 858 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 NR6A1Q15406 480 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 ATF7IP2Q5U623 682 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 CEP135Q66GS9 1140 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 NOSTRINQ8IVI9 506 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 EXOC8Q8IYI6 725 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 TPCN2Q8NHX9 752 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 SCFD1Q8WVM8 642 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 TCP11Q8WWU5 503 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 ANO3Q9BYT9 981 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 BTBD1Q9H0C5 482 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 DHX33Q9H6R0 707 aaKnown RBP7.74□□□□□ -1.17
SSXP3-201ENST00000442971 CYLDQ9NQC7 956 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 NPDC1Q9NQX5 325 aaPredicted RBP7.74□□□□□ -1.17
SSXP3-201ENST00000442971 MAP10Q9P2G4 905 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 PISDQ9UG56 409 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 PCDHGB6Q9Y5F9 930 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 U3KQA8 63 aa7.74□□□□□ -1.17
SSXP3-201ENST00000442971 RP1P56715 2156 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 VPS13CQ709C8 3753 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 POLEQ07864 2286 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 C2orf78A6NCI8 922 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 PRRT4C9JH25 899 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 WNT9AO14904 365 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 NKX2-8O15522 239 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 CHMP2AO43633 222 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 FOSP01100 380 aaPredicted RBP7.73□□□□□ -1.17
SSXP3-201ENST00000442971 JMJD7P0C870 316 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 LIFP15018 202 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 SFNP31947 248 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 GRM5P41594 1212 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 HARS2P49590 506 aaKnown RBP7.73□□□□□ -1.17
SSXP3-201ENST00000442971 JAK3P52333 1124 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 COPAP53621 1224 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 NPEPPSP55786 919 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 POU5F1BQ06416 359 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 TFDP1Q14186 410 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 DEFB109BQ30KR1 87 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 NUGGCQ68CJ6 796 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 GRAMD4Q6IC98 578 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 ARMCX5Q6P1M9 558 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 DSG4Q86SJ6 1040 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 USP37Q86T82 979 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 SPATS2Q86XZ4 545 aaKnown RBP7.73□□□□□ -1.17
SSXP3-201ENST00000442971 SMR3AQ99954 134 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 EPB41L5Q9HCM4 733 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 FOXJ2Q9P0K8 574 aa7.73□□□□□ -1.17
SSXP3-201ENST00000442971 PNMA8BQ9ULN7 279 aaPredicted RBP7.73□□□□□ -1.17
SSXP3-201ENST00000442971 MYH10P35580 1976 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 HOXC11O43248 304 aaPredicted RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 ZG16O60844 167 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 GIMD1P0DJR0 217 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 CSH1P0DML2 217 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 CSH2P0DML3 217 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 PRKAR1AP10644 381 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 DGKAP23743 735 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 CD82P27701 267 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 RPL9P32969 192 aaKnown RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 SETQ01105 290 aaPredicted RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 RUNX1T1Q06455 604 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 MXD4Q14582 209 aaPredicted RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 SEC23AQ15436 765 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 KIAA0895LQ68EN5 471 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 STKLD1Q8NE28 680 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 SPZ1Q9BXG8 430 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 EBF2Q9HAK2 575 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 GJB4Q9NTQ9 266 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 UCKL1Q9NWZ5 548 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 COPG2Q9UBF2 871 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 UXTQ9UBK9 157 aaPredicted RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 NEU2Q9Y3R4 380 aa7.72□□□□□ -1.17
SSXP3-201ENST00000442971 KLF2Q9Y5W3 355 aaPredicted RBP7.72□□□□□ -1.17
SSXP3-201ENST00000442971 TDRD6O60522 2096 aaKnown RBP7.71□□□□□ -1.18
SSXP3-201ENST00000442971 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.71□□□□□ -1.18
SSXP3-201ENST00000442971 CPED1A4D0V7 1026 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 M0QZQ0 153 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 CT47B1P0C2W7 299 aaPredicted RBP7.71□□□□□ -1.18
SSXP3-201ENST00000442971 ALPPL2P10696 532 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.18
SSXP3-201ENST00000442971 VARSP26640 1264 aaKnown RBP7.71□□□□□ -1.18
SSXP3-201ENST00000442971 HSPA4P34932 840 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 RFC5P40937 340 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 TRAPPC10P48553 1259 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 CDC20Q12834 499 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 ZNF177Q13360 481 aaPredicted RBP7.71□□□□□ -1.18
SSXP3-201ENST00000442971 ART3Q13508 389 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 NADK2Q4G0N4 442 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 SLC39A12Q504Y0 691 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 SLC45A4Q5BKX6 768 aa7.71□□□□□ -1.18
SSXP3-201ENST00000442971 CRTC1Q6UUV9 634 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms