RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
TTC28-203ENST00000442232 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 MIB1Q86YT6 1006 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 SMYD4Q8IYR2 804 aaPredicted RBP12.39□□□□□ -0.43
TTC28-203ENST00000442232 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 OLIG1Q8TAK6 271 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 PIGKQ92643 395 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 NUSAP1Q9BXS6 441 aaKnown RBP12.39□□□□□ -0.43
TTC28-203ENST00000442232 CNTNAP3Q9BZ76 1288 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 DCLK3Q9C098 648 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 CISHQ9NSE2 258 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
TTC28-203ENST00000442232 RAB20Q9NX57 234 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 CLIC5Q9NZA1 410 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 RASAL2Q9UJF2 1139 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 HHLA1C9JL84 531 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 AP5Z1O43299 807 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 CACNG3O60359 315 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 DGKGP49619 791 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 KIF11P52732 1056 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 COG7P83436 770 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 MESP2Q0VG99 397 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 LMAN2Q12907 356 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 E2F5Q15329 346 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 LYSMD4Q5XG99 296 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 SLC36A4Q6YBV0 504 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 ARMCX6Q7L4S7 300 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 CHPFQ8IZ52 775 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 RLN3Q8WXF3 142 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 WBP2Q969T9 261 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 EEF2KMTQ96G04 330 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 GSDMAQ96QA5 445 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 NMUR1Q9HB89 426 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 TMEM9BQ9NQ34 198 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 RXFP3Q9NSD7 469 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 OSER1Q9NX31 292 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 NUDT5Q9UKK9 219 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 ANGPTL2Q9UKU9 493 aa12.38□□□□□ -0.43
TTC28-203ENST00000442232 TNRC6BQ9UPQ9 1833 aaKnown RBP12.38□□□□□ -0.43
TTC28-203ENST00000442232 TPRP12270 2363 aaKnown RBP12.38□□□□□ -0.43
TTC28-203ENST00000442232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 LNP1A1A4G5 178 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 ANTXRLA6NF34 631 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 MDM4O15151 490 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 ADAM23O75077 832 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 CYBBP04839 570 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 HNRNPLP14866 589 aaKnown RBP eCLIP12.37□□□□□ -0.431e-10■□□□□ 11.1
TTC28-203ENST00000442232 CHKAP35790 457 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 WASP42768 502 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 PGFP49763 221 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 BCAT1P54687 386 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 FKBP3Q00688 224 aaKnown RBP12.37□□□□□ -0.43
TTC28-203ENST00000442232 RPL6Q02878 288 aaKnown RBP12.37□□□□□ -0.43
TTC28-203ENST00000442232 EFEMP1Q12805 493 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 ZNF658Q5TYW1 1059 aaPredicted RBP12.37□□□□□ -0.43
TTC28-203ENST00000442232 EGFLAMQ63HQ2 1017 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 TMEFF1Q8IYR6 380 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 UCMAQ8WVF2 138 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 BHMTQ93088 406 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
TTC28-203ENST00000442232 STARD13Q9Y3M8 1113 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 ACACBO00763 2458 aa12.37□□□□□ -0.43
TTC28-203ENST00000442232 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 PSMA7O14818 248 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 ZNF217O75362 1048 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 STC2O76061 302 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 KCNK5O95279 499 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 HMBSP08397 361 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 CD19P15391 556 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 TBXAS1P24557 533 aaPredicted RBP12.36□□□□□ -0.43
TTC28-203ENST00000442232 CORO1AP31146 461 aaKnown RBP12.36□□□□□ -0.43
TTC28-203ENST00000442232 PI4KAP42356 2102 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 PRCPP42785 496 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 NOVA1P51513 510 aaKnown RBP12.36□□□□□ -0.43
TTC28-203ENST00000442232 NUCB2P80303 420 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 STARD3Q14849 445 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 GOLGA7BQ2TAP0 167 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 COBLL1Q53SF7 1204 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 SGO2Q562F6 1265 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 ARHGAP17Q68EM7 881 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 PSAPL1Q6NUJ1 521 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 Q6ZNB5 142 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 SYT12Q8IV01 421 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 ZNF276Q8N554 614 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 SLC4A11Q8NBS3 891 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 SEMA4DQ92854 862 aa12.36□□□□□ -0.43
TTC28-203ENST00000442232 IPO9Q96P70 1041 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms