RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 TAS2R40P59535 323 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.24
MCF2L-217ENST00000441756 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 ARL13BQ3SXY8 428 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 PABPC1LQ4VXU2 614 aaKnown RBP16.58■□□□□ 0.24
MCF2L-217ENST00000441756 BOLA3Q53S33 107 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 SYPL2Q5VXT5 272 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 SCYL2Q6P3W7 929 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 SCD5Q86SK9 330 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 PSTKQ8IV42 348 aaKnown RBP16.58■□□□□ 0.24
MCF2L-217ENST00000441756 ZNF276Q8N554 614 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 CEP112Q8N8E3 955 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 KRT35Q92764 455 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 GCNAQ96QF7 691 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 L2HGDHQ9H9P8 463 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 CERS4Q9HA82 394 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 DDIT4Q9NX09 232 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 MDM4O15151 490 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 CEP104O60308 925 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 XYLBO75191 536 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 ZMYND10O75800 440 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 ZRANB2O95218 330 aaKnown RBP eCLIP16.57■□□□□ 0.24
MCF2L-217ENST00000441756 TRUB2O95900 331 aaKnown RBP16.57■□□□□ 0.24
MCF2L-217ENST00000441756 FYNP06241 537 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 ZDHHC11BP0C7U3 371 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 SPATA31D3P0C874 917 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 RARGP13631 454 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 HMGA1P17096 107 aaKnown RBP16.57■□□□□ 0.24
MCF2L-217ENST00000441756 CXCR5P32302 372 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 TUBP50607 506 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 HDAC4P56524 1084 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 COPS2P61201 443 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 NME3Q13232 169 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 NNTQ13423 1086 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 SNX30Q5VWJ9 437 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 SPATA31D4Q6ZUB0 917 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 CPNE8Q86YQ8 564 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 MAP7D3Q8IWC1 876 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 RCOR2Q8IZ40 523 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 DQX1Q8TE96 717 aaKnown RBP16.57■□□□□ 0.24
MCF2L-217ENST00000441756 MAIP1Q8WWC4 291 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 ALG3Q92685 438 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 MRPL38Q96DV4 380 aaKnown RBP16.57■□□□□ 0.24
MCF2L-217ENST00000441756 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 PRO3102Q9H379 93 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 ZWILCHQ9H900 591 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 MAN1C1Q9NR34 630 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
MCF2L-217ENST00000441756 PCSK1NQ9UHG2 260 aa16.57■□□□□ 0.24
MCF2L-217ENST00000441756 TMEM265A0A087WTH1 108 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
MCF2L-217ENST00000441756 IRAK2O43187 625 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 POU2F2P09086 479 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 SLC2A3P11169 496 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 MARCKSL1P49006 195 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 KPNA1P52294 538 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-217ENST00000441756 MTA1Q13330 715 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 DAB2IPQ5VWQ8 1189 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 BNIPLQ7Z465 357 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 DNAJB7Q7Z6W7 309 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-217ENST00000441756 CCDC50Q8IVM0 306 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 ARFGAP1Q8N6T3 406 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 LEMD2Q8NC56 503 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 ACTRT1Q8TDG2 376 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 SLC22A17Q8WUG5 538 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 NTAN1Q96AB6 310 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 TLE6Q9H808 572 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 NMUR1Q9HB89 426 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 ZDHHC7Q9NXF8 308 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.56■□□□□ 0.24
MCF2L-217ENST00000441756 GREB1Q4ZG55 1949 aa16.56■□□□□ 0.24
MCF2L-217ENST00000441756 SYNJ2BP-COX16A0A087WUM0 186 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 SRGAP2O75044 1071 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 SRGAP2BP0DMP2 458 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 CDC25CP30307 473 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 PDK2Q15119 407 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 DUSP6Q16828 381 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 LRIT3Q3SXY7 679 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 EFHC2Q5JST6 749 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 BRMS1LQ5PSV4 323 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 C10orf120Q5SQS8 335 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 ERMARDQ5T6L9 678 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 SH3PXD2AQ5TCZ1 1133 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 OTUD1Q5VV17 481 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-217ENST00000441756 TAC4Q86UU9 113 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 VSIG1Q86XK7 387 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 RASGEF1CQ8N431 466 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 COG1Q8WTW3 980 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 RNF34Q969K3 372 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 CAPZA3Q96KX2 299 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 NACA2Q9H009 215 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 DZANK1Q9NVP4 752 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 COX16Q9P0S2 106 aa16.55■□□□□ 0.24
MCF2L-217ENST00000441756 TTC7AQ9ULT0 858 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-217ENST00000441756 LRRD1A4D1F6 860 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 TLR5O60602 858 aa16.54■□□□□ 0.24
MCF2L-217ENST00000441756 IGLV3-25P01717 112 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms