RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 ARL2P36404 184 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 MATKP42679 507 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CCNHP51946 323 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 RIPPLY3P57055 190 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 MRPS21P82921 87 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 DUSP4Q13115 394 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SUZ12Q15022 739 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 RBBP5Q15291 538 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 EPHA7Q15375 998 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 GLE1Q53GS7 698 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 WDR45BQ5MNZ6 344 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CDKAL1Q5VV42 579 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 NAA35Q5VZE5 725 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CYB5D1Q6P9G0 228 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 TMEM92Q6UXU6 159 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CCDC121Q6ZUS5 278 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 NLRP14Q86W24 1093 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 NOSTRINQ8IVI9 506 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 ZBTB8OSQ8IWT0 167 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CMTM8Q8IZV2 173 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 ARFGAP2Q8N6H7 521 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF513Q8N8E2 541 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SPATA20Q8TB22 786 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 ATP2A3Q93084 1043 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SAAL1Q96ER3 474 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CCDC114Q96M63 670 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 FAM20AQ96MK3 541 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CCDC43Q96MW1 224 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CCT8L2Q96SF2 557 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 MMS19Q96T76 1030 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 RNF26Q9BY78 433 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 CXCL16Q9H2A7 254 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 PDZD7Q9H5P4 517 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 GAREM1Q9H706 876 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 KCNMB3Q9NPA1 279 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SH3GLB2Q9NR46 395 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 DUS2Q9NX74 493 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 VPS54Q9P1Q0 977 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SEPT3Q9UH03 358 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 DDX25Q9UHL0 483 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 TPX2Q9ULW0 747 aaKnown RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.31
HDAC6-210ENST00000441703 EPN1Q9Y6I3 576 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-210ENST00000441703 OBSL1O75147 1896 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 MYO9AB2RTY4 2548 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 A0A1B0GTW7 788 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 C5orf60A6NFR6 353 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 LRRIQ4A6NIV6 560 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 HMGB1P1B2RPK0 211 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 TEX33O43247 280 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 NDUFS2O75306 463 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 PPP1R37O75864 691 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 LYPLA2O95372 231 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF883P0CG24 379 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 HNRNPLP14866 589 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 PECAM1P16284 738 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 DDX6P26196 483 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 TIE1P35590 1138 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 MDH1P40925 334 aaKnown RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 CCT2P78371 535 aaKnown RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 KRT83P78385 493 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 GUCY1B3Q02153 619 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 NFATC3Q12968 1075 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 SERINC3Q13530 473 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 MRPL58Q14197 206 aaKnown RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 POSTNQ15063 836 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 PDCD2Q16342 344 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 SKIDA1Q1XH10 827 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 DCAF4L1Q3SXM0 396 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 HSF5Q4G112 596 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 TTMPQ5BVD1 217 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 RNF187Q5TA31 235 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 NCAPH2Q6IBW4 605 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 IL27RAQ6UWB1 636 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 APBB1IPQ7Z5R6 666 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 IQCKQ8N0W5 287 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 MREGQ8N565 214 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 ALLCQ8N6M5 410 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 BEST2Q8NFU1 509 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 BAHD1Q8TBE0 780 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 MYCBPAPQ8TBZ2 947 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 OSCP1Q8WVF1 389 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 DDX12PQ92771 950 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 USP13Q92995 863 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 CCDC47Q96A33 483 aaKnown RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 ARL8AQ96BM9 186 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 ANKRD27Q96NW4 1050 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 RUFY1Q96T51 708 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 SLC46A2Q9BY10 475 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 POLR3FQ9H1D9 316 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-210ENST00000441703 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 FZD8Q9H461 694 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 EBF2Q9HAK2 575 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 TDP1Q9NUW8 608 aa6.83□□□□□ -1.32
HDAC6-210ENST00000441703 SLC38A7Q9NVC3 462 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms