RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ANKRD52Q8NB46 1076 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 TTC13Q8NBP0 860 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 B3GALNT2Q8NCR0 500 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 MED10Q9BTT4 135 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 SLC4A5Q9BY07 1137 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 KLHL14Q9P2G3 628 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 ZMYND8Q9ULU4 1186 aaPredicted RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 TIMM13Q9Y5L4 95 aaPredicted RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 RALGAPA2Q2PPJ7 1873 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 DPPA5A6NC42 116 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 UNC5CO95185 931 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 IGHA2P01877 340 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 THP07101 528 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 GNAZP19086 355 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 PTPN7P35236 360 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 PKDCCQ504Y2 493 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 ZC3H18Q86VM9 953 aaKnown RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 ECHDC2Q86YB7 292 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 C9orf72Q96LT7 481 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 RAB3IPQ96QF0 476 aaPredicted RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 RSAD1Q9HA92 442 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 NEU2Q9Y3R4 380 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 CASTOR2A6NHX0 329 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 GOLGA8MH3BSY2 632 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 CLDN5O00501 218 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 MCF2LO15068 1137 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 GPR182O15218 404 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 SNUPNO95149 360 aaKnown RBP14.71□□□□□ -0.05
LIMD1-202ENST00000440097 IGFBP6P24592 240 aaPredicted RBP14.71□□□□□ -0.05
LIMD1-202ENST00000440097 CD52P31358 61 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 XKR4Q5GH76 650 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 ARHGAP17Q68EM7 881 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 ANO7Q6IWH7 933 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 RHBDF2Q6PJF5 856 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 BBS12Q6ZW61 710 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 SERINC5Q86VE9 423 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 MAP7D3Q8IWC1 876 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 TEX9Q8N6V9 391 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 CMASQ8NFW8 434 aaPredicted RBP14.71□□□□□ -0.05
LIMD1-202ENST00000440097 SPATA18Q8TC71 538 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 RBM15Q96T37 977 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIMD1-202ENST00000440097 SLC38A7Q9NVC3 462 aa14.71□□□□□ -0.05
LIMD1-202ENST00000440097 SKIV2L2P42285 1042 aaKnown RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 SCNN1GP51170 649 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 CLCNKBP51801 687 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 EIF3EP60228 445 aaKnown RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 RNASELQ05823 741 aaKnown RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 OASLQ15646 514 aaKnown RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 ZC3H12AQ5D1E8 599 aaKnown RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 RNF43Q68DV7 783 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 DRICH1Q6PGQ1 229 aaPredicted RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 DSTYKQ6XUX3 929 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 CRYBG2Q8N1P7 616 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 SERPINB12Q96P63 405 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 SENP6Q9GZR1 1112 aaPredicted RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 AGO3Q9H9G7 860 aaKnown RBP14.71□□□□□ -0.06
LIMD1-202ENST00000440097 HEY1Q9Y5J3 304 aa14.71□□□□□ -0.06
LIMD1-202ENST00000440097 MAP3K6O95382 1288 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ITGAVP06756 1048 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 FESP07332 822 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 BRAFP15056 766 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 PECAM1P16284 738 aaPredicted RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 STX2P32856 288 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 SP3Q02447 781 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 RBBP5Q15291 538 aaKnown RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 PAN2Q504Q3 1202 aaKnown RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 CAPN12Q6ZSI9 719 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 FBF1Q8TES7 1133 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 NKD2Q969F2 451 aaPredicted RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ANKRD27Q96NW4 1050 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 PPP1R10Q96QC0 940 aaKnown RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ETAA1Q9NY74 926 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 DRG1Q9Y295 367 aaKnown RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 INPP5FQ9Y2H2 1132 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 LRRC42Q9Y546 428 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 SYNJ2BP-COX16A0A087WUM0 186 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ANKRD33BA6NCL7 494 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ARL5CA6NH57 179 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 TTC4O95801 387 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 RBP3P10745 1247 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 TKTP29401 623 aaKnown RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ADCY1Q08828 1119 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 MDH1BQ5I0G3 518 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 NPNTQ6UXI9 565 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 OSTM1Q86WC4 334 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 ZDHHC17Q8IUH5 632 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 FAM71DQ8N9W8 422 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 SLC35B2Q8TB61 432 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 TSPAN18Q96SJ8 248 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 RNPEPL1Q9HAU8 725 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 SAYSD1Q9NPB0 183 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 RNF186Q9NXI6 227 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 DDX43Q9NXZ2 648 aaKnown RBP14.7□□□□□ -0.06
LIMD1-202ENST00000440097 COX16Q9P0S2 106 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 PCDH10Q9P2E7 1040 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 PADI3Q9ULW8 664 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 EFR3BQ9Y2G0 817 aa14.7□□□□□ -0.06
LIMD1-202ENST00000440097 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 AHCYL1O43865 530 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms