RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PLEKHG4Q58EX7 1191 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 BTBD8Q5XKL5 378 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 ZDHHC24Q6UX98 284 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 C4orf50Q6ZRC1 276 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 OTOP2Q7RTS6 562 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 UNC45BQ8IWX7 931 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 PIGVQ9NUD9 493 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 CALCOCO1Q9P1Z2 691 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 SFMBT1Q9UHJ3 866 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.67■□□□□ 0.1
CPSF7-205ENST00000439958 ARHGEF37A1IGU5 675 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 AGPSO00116 658 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 GBE1Q04446 702 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 KYNUQ16719 465 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 EFHC2Q5JST6 749 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 SLC43A3Q8NBI5 491 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 FAM71BQ8TC56 605 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 TNFRSF8P28908 595 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 LBX1P52954 281 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 SLC5A3P53794 718 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 DAOAP59103 153 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 ACAP1Q15027 740 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 ANKRD20A8PQ5CZ79 823 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 CMASQ8NFW8 434 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-205ENST00000439958 MED4Q9NPJ6 270 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 BANF1O75531 89 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 SYF2O95926 243 aaKnown RBP15.66■□□□□ 0.1
CPSF7-205ENST00000439958 RAG1P15918 1043 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 NOS2P35228 1153 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 NNTQ13423 1086 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 GPNMBQ14956 572 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 SMAD1Q15797 465 aaKnown RBP15.66■□□□□ 0.1
CPSF7-205ENST00000439958 SLC25A52Q3SY17 297 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 BBS12Q6ZW61 710 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 MIB1Q86YT6 1006 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 GIPC2Q8TF65 315 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 RNF139Q8WU17 664 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 RNF157Q96PX1 679 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 TRAIPQ9BWF2 469 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 COLEC11Q9BWP8 271 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 SQORQ9Y6N5 450 aa15.66■□□□□ 0.1
CPSF7-205ENST00000439958 PRRC2BQ5JSZ5 2229 aaKnown RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 PIAS1O75925 651 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 SHBGP04278 402 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 RDXP35241 583 aaKnown RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 IKBKEQ14164 716 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 UAP1Q16222 522 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 ANKMY2Q8IV38 441 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 TTC13Q8NBP0 860 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 PCDH19Q8TAB3 1148 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 SAYSD1Q9NPB0 183 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 ZDHHC18Q9NUE0 388 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 TBK1Q9UHD2 729 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 C3orf70A6NLC5 250 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 MTMR3Q13615 1198 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 CD300LGQ6UXG3 332 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 C12orf50Q8NA57 414 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 KCTD15Q96SI1 283 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 ETNK2Q9NVF9 386 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 OGDHLQ9ULD0 1010 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 APOC4-APOC2K7ER74 178 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 APOC2P02655 101 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 CSF2RAP15509 400 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 CTCFP49711 727 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 AP1B1Q10567 949 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 MAPRE1Q15691 268 aaKnown RBP15.65■□□□□ 0.1
CPSF7-205ENST00000439958 ALS2CLQ60I27 953 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 FUT10Q6P4F1 479 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 ZNF354CQ86Y25 554 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 NPAS4Q8IUM7 802 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 FAM76AQ8TAV0 307 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 WDCPQ9H6R7 721 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 VPS37BQ9H9H4 285 aa15.65■□□□□ 0.1
CPSF7-205ENST00000439958 MDM4O15151 490 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 HSPA9P38646 679 aaKnown RBP15.64■□□□□ 0.09
CPSF7-205ENST00000439958 PTK6Q13882 451 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 ZNF280DQ6N043 979 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 DCP1BQ8IZD4 617 aaKnown RBP15.64■□□□□ 0.09
CPSF7-205ENST00000439958 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.093e-6■□□□□ 8.7
CPSF7-205ENST00000439958 NACA2Q9H009 215 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 CNGB3Q9NQW8 809 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 ADAM21Q9UKJ8 722 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 PCDHB8Q9UN66 801 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 CDY1Q9Y6F8 540 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 ITIH2P19823 946 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 RBL1P28749 1068 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 DUSP4Q13115 394 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 TAF12Q16514 161 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 BBS9Q3SYG4 887 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 TAS1R1Q7RTX1 841 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 PLD5Q8N7P1 536 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 CCDC110Q8TBZ0 833 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 UBE2Q2Q8WVN8 375 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 TKTL2Q9H0I9 626 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 RAB6BQ9NRW1 208 aa15.64■□□□□ 0.09
CPSF7-205ENST00000439958 WBP1LQ9NX94 342 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms