RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 HADHBP55084 474 aaKnown RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 GSCP56915 257 aaPredicted RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC8A3P57103 927 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ERVFC1P60507 584 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ERVK-21P61565 698 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 GNG11P61952 73 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ETF1P62495 437 aaKnown RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ADCY1Q08828 1119 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CAMK1Q14012 370 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 RAB33AQ14088 237 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 RAB41Q5JT25 222 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ZNF569Q5MCW4 686 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 LIN9Q5TKA1 542 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 OLFML1Q6UWY5 402 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 C4orf50Q6ZRC1 276 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 FAM183BPQ6ZVS7 135 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 PRICKLE2Q7Z3G6 844 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 RHOT2Q8IXI1 618 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 LRRC57Q8N9N7 239 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 C3orf20Q8ND61 904 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 FEZF2Q8TBJ5 459 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CLEC4CQ8WTT0 213 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 NDRG1Q92597 394 aaKnown RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 FUBP3Q96I24 572 aaKnown RBP eCLIP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 PIWIL1Q96J94 861 aaKnown RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 C8orf48Q96LL4 319 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 C16orf45Q96MC5 204 aaPredicted RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 WDR24Q96S15 920 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 NUP85Q9BW27 656 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 TRIM7Q9C029 511 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 MIS12Q9H081 205 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 NKX2-4Q9H2Z4 354 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 PRO3102Q9H379 93 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 SYNCQ9H7C4 482 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 DMAP1Q9NPF5 467 aaPredicted RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ST7Q9NRC1 585 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 PARVAQ9NVD7 372 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 FNIP2Q9P278 1114 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CTTNBP2NLQ9P2B4 639 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 WDR35Q9P2L0 1181 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 UVRAGQ9P2Y5 699 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 MTUS1Q9ULD2 1270 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 STRIP2Q9ULQ0 834 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 RWDD3Q9Y3V2 267 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 PCDHGC5Q9Y5F6 944 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CITO14578 2027 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 SCN1AP35498 2009 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 SIGLEC16A6NMB1 481 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 HIDE1A8MVS5 230 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 F8VP50 259 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 H3BNC9 293 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 GOLGA8SH3BPF8 625 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 FSCN2O14926 492 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 KIF5CO60282 957 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 PALMO75781 387 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SOAT2O75908 522 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SEC24AO95486 1093 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 KRT3P12035 628 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 RFC1P35251 1148 aaPredicted RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 GRIK1P39086 918 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 ACADSBP45954 432 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TKTL1P51854 596 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 NAP1L1P55209 391 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 RPL7AP62424 266 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC6A3Q01959 620 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 OGDHQ02218 1023 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 UBE3AQ05086 875 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 ZNF252P-AS1Q0IIN9 211 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 ADIGQ0VDE8 80 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 DUSP4Q13115 394 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TAF5Q15542 800 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 DDR2Q16832 855 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SDHAF4Q5VUM1 108 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 OR6B2Q6IFH4 312 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TRNP1Q6NT89 227 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 DNAJC24Q6P3W2 148 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 VSTM1Q6UX27 236 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SYT10Q6XYQ8 523 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TRIM67Q6ZTA4 783 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 BHLHA9Q7RTU4 235 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SLFN11Q7Z7L1 901 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 CPNE8Q86YQ8 564 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SCN4BQ8IWT1 228 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 GALNT12Q8IXK2 581 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 TDHQ8IZJ6 230 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SLC35F6Q8N357 371 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 MRPL43Q8N983 215 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 MSANTD4Q8NCY6 345 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 JOSD2Q8TAC2 188 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 ZNF461Q8TAF7 563 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 ZNF564Q8TBZ8 553 aaPredicted RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 SPPL2BQ8TCT7 592 aa7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 EPS8L3Q8TE67 593 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 IPO4Q8TEX9 1081 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 C2orf15Q8WU43 125 aaKnown RBP7.38□□□□□ -1.23
LSM3P3-201ENST00000436601 POF1BQ8WVV4 589 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms