RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ELK3P41970 407 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 MATKP42679 507 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 INHBEP58166 350 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 KIAA0319Q5VV43 1072 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 PAQR9Q6ZVX9 377 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 FAM131BQ86XD5 332 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 IGDCC3Q8IVU1 814 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 C4orf33Q8N1A6 199 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 PYROXD2Q8N2H3 581 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 GSTCDQ8NEC7 633 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 SENP6Q9GZR1 1112 aaPredicted RBP16.86■□□□□ 0.29
MBD4-203ENST00000429544 PPCSQ9HAB8 311 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 FGFR1OP2Q9NVK5 253 aa16.86■□□□□ 0.29
MBD4-203ENST00000429544 GOLGA6L7A0A1B0GV03 622 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 CHADO15335 359 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 DAB1O75553 588 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 MFSD14CQ5VZR4 134 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 PPP1R21Q6ZMI0 780 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 STRADAQ7RTN6 431 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 CDKL3Q8IVW4 592 aaPredicted RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 CSPG4P5Q96PW8 444 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 ACSS3Q9H6R3 686 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 SLC38A7Q9NVC3 462 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 MIOSQ9NXC5 875 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 DDX43Q9NXZ2 648 aaKnown RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 MFHAS1Q9Y4C4 1052 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 GABRDO14764 452 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 IBSPP21815 317 aaPredicted RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 NDUFV1P49821 464 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 RABGGTBP53611 331 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 PITX1P78337 314 aaPredicted RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 SLC10A2Q12908 348 aaPredicted RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 ZKSCAN8Q15776 578 aaPredicted RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 DCAF6Q58WW2 860 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 CLEC20AQ6ZU45 233 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 HACE1Q8IYU2 909 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 CCDC110Q8TBZ0 833 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 PAFAH2Q99487 392 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 PAIP2Q9BPZ3 127 aaKnown RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 OSBPL7Q9BZF2 842 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 CRTAC1Q9NQ79 661 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 KRT82Q9NSB4 513 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
MBD4-203ENST00000429544 TIMM13Q9Y5L4 95 aaPredicted RBP16.85■□□□□ 0.29
MBD4-203ENST00000429544 A0A1W2PPM1 405 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 FAM155AB1AL88 458 aaPredicted RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 AVILO75366 819 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 THP07101 528 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 GOT1P17174 413 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 AMPD1P23109 780 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 CLCNKBP51801 687 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 MAP3K7CLP57077 242 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 MRPS5P82675 430 aaKnown RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 TRIM32Q13049 653 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 KLHL38Q2WGJ6 581 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SLC25A52Q3SY17 297 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 NUGGCQ68CJ6 796 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SMC6Q96SB8 1091 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 LRRC4Q9HBW1 653 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 ETNK2Q9NVF9 386 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 SCNN1GP51170 649 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 WDR4P57081 412 aaKnown RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 SREBF2Q12772 1141 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 RASA2Q15283 850 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SPRED3Q2MJR0 410 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SLC45A4Q5BKX6 768 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 OTUD1Q5VV17 481 aaPredicted RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 SERINC5Q86VE9 423 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 ZIC5Q96T25 663 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 KLC2Q9H0B6 622 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 UPF3AQ9H1J1 476 aaKnown RBP16.84■□□□□ 0.29
MBD4-203ENST00000429544 SPC25Q9HBM1 224 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 SENP1Q9P0U3 644 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 FZD10Q9ULW2 581 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 CAPN7Q9Y6W3 813 aa16.84■□□□□ 0.29
MBD4-203ENST00000429544 ARL5CA6NH57 179 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 PRPF4O43172 522 aaKnown RBP eCLIP16.83■□□□□ 0.28
MBD4-203ENST00000429544 FAM200BP0CF97 657 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
MBD4-203ENST00000429544 YWHAGP61981 247 aaKnown RBP eCLIP16.83■□□□□ 0.28
MBD4-203ENST00000429544 NCBP2-AS2Q69YL0 99 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 DSTYKQ6XUX3 929 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 C3orf58Q8NDZ4 430 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 SGSM3Q96HU1 749 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 MAGEB18Q96M61 343 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 AGO3Q9H9G7 860 aaKnown RBP16.83■□□□□ 0.28
MBD4-203ENST00000429544 TMPRSS4Q9NRS4 437 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 FETUBQ9UGM5 382 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 TEX264Q9Y6I9 313 aa16.83■□□□□ 0.28
MBD4-203ENST00000429544 CASTOR2A6NHX0 329 aa16.82■□□□□ 0.28
MBD4-203ENST00000429544 TSHRP16473 764 aa16.82■□□□□ 0.28
MBD4-203ENST00000429544 ARL4AP40617 200 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms