RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MAN1A1P33908 653 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 NOS2P35228 1153 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 GJC1P36383 396 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 PTPN9P43378 593 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 PPP3CCP48454 512 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 DNA2P51530 1060 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 NTHL1P78549 312 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 CYP4F8P98187 520 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 EFEMP1Q12805 493 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 NME3Q13232 169 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 KCNC3Q14003 757 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 PIGHQ14442 188 aaPredicted RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SKIV2LQ15477 1246 aaKnown RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 C15orf59Q2T9L4 293 aaPredicted RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC25A52Q3SY17 297 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 ARHGAP15Q53QZ3 475 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 HECTD3Q5T447 861 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 DAB2IPQ5VWQ8 1189 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SYPL2Q5VXT5 272 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SND1Q7KZF4 910 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 BEND5Q7L4P6 421 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 ARCQ7LC44 396 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 PEX26Q7Z412 305 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC35F6Q8N357 371 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 DEFB123Q8N688 67 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 LRRC57Q8N9N7 239 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 CMASQ8NFW8 434 aaPredicted RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 FAM172AQ8WUF8 416 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 KHSRPQ92945 711 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 CDK5RAP1Q96SZ6 601 aaKnown RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 TBCBQ99426 244 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SMOC2Q9H3U7 446 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLITRK6Q9H5Y7 841 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 IL21Q9HBE4 155 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 OLA1Q9NTK5 396 aaKnown RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 DDIT4Q9NX09 232 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 RRN3Q9NYV6 651 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 MARCH2Q9P0N8 246 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 DNMT3BQ9UBC3 853 aaKnown RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 NUDT5Q9UKK9 219 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 MRPS23Q9Y3D9 190 aaKnown RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 HYOU1Q9Y4L1 999 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 PATJQ8NI35 1801 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TRAV19A0A0A6YYK7 116 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 C2orf78A6NCI8 922 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF197O14709 1029 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 MDM4O15151 490 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 COCHO43405 550 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 LRCH4O75427 683 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TRUB2O95900 331 aaKnown RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 F11P03951 625 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CEBPBP17676 345 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 POU3F3P20264 500 aaPredicted RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 RDXP35241 583 aaKnown RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC1A1P43005 524 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TUBP50607 506 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 EPHA5P54756 1037 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 PITX1P78337 314 aaPredicted RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 DEUP1Q05D60 604 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 ADAM15Q13444 863 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TEAD2Q15562 447 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCDC85BQ15834 202 aaPredicted RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CLUL1Q15846 466 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC5A9Q2M3M2 681 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCDC14Q49A88 953 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZFYVE27Q5T4F4 411 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 STXBP5Q5T5C0 1151 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 GPR158Q5T848 1215 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SH3PXD2AQ5TCZ1 1133 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 OTUD1Q5VV17 481 aaPredicted RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CES5AQ6NT32 575 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 GPR153Q6NV75 609 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 MSANTD2Q6P1R3 559 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SCYL2Q6P3W7 929 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SYCE2Q6PIF2 218 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 GAREM2Q75VX8 874 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 GPR149Q86SP6 731 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TMEM150AQ86TG1 271 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 FAM131BQ86XD5 332 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CPNE8Q86YQ8 564 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 NIPA2Q8N8Q9 360 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TTC16Q8NEE8 873 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SHKBP1Q8TBC3 707 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 ING5Q8WYH8 240 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 RNF34Q969K3 372 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 PABPC5Q96DU9 382 aaKnown RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 TCEAL4Q96EI5 215 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SERPINB11Q96P15 392 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 NPY6RQ99463 290 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 CDX2Q99626 313 aaPredicted RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 DDX23Q9BUQ8 820 aaKnown RBP8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 LRRC3Q9BY71 257 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 PIGVQ9NUD9 493 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SMPD4Q9NXE4 827 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 SFMBT1Q9UHJ3 866 aa8.25□□□□□ -1.09
HMGA1P4-201ENST00000428643 DNMT3LQ9UJW3 386 aa8.25□□□□□ -1.09
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