RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SLCO1B3Q9NPD5 702 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCDC177Q9NQR7 707 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 FBXO28Q9NVF7 368 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 THG1LQ9NWX6 298 aaKnown RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 NCKIPSDQ9NZQ3 722 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 UBA2Q9UBT2 640 aaPredicted RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 STK39Q9UEW8 545 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 XPO7Q9UIA9 1087 aaKnown RBP5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 CDH22Q9UJ99 828 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 STOML2Q9UJZ1 356 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 NUP50Q9UKX7 468 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PTPN22Q9Y2R2 807 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPME1Q9Y570 386 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 TIMM22Q9Y584 194 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 ALG6Q9Y672 507 aa5.8□□□□□ -1.48
VTI1BP4-201ENST00000427516 MROH5Q6ZUA9 1318 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CNTNAP5Q8WYK1 1306 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADAMTS7Q9UKP4 1686 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAGEB16A2A368 324 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 KRBA1A5PL33 1030 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CAPN8A6NHC0 703 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 C16orf96A6NNT2 1141 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM155AB1AL88 458 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 H3BNH8 94 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 H3BSA7 217 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PDXKO00764 312 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 COPEO14579 308 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 BET1O15155 118 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PDPK1O15530 556 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DYRK3O43781 588 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 SCO2O43819 266 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 TOM1O60784 492 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 H2AFYO75367 372 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 LGR5O75473 907 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GPC4O75487 556 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DAB1O75553 588 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 RSL1D1O76021 490 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 EGFRP00533 1210 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 F12P00748 615 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 APOA1P02647 267 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 FUCA1P04066 466 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PCCAP05165 728 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 INHBAP08476 426 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 SNRPA1P09661 255 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 RBP3P10745 1247 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 BMP1P13497 986 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 SNRPBP14678 240 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CTRB1P17538 263 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GRK2P25098 689 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CNTFP26441 200 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 RRM2P31350 389 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CSTF2P33240 577 aaKnown RBP eCLIP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAP3K7CLP57077 242 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DEFA1P59665 94 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DEFA3P59666 94 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 SRP54P61011 504 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADAM17P78536 824 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 MYBPC1Q00872 1141 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 KDSRQ06136 332 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GRSF1Q12849 480 aaKnown RBP eCLIP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 MPP2Q14168 576 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CTTNQ14247 550 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 FLOT2Q14254 428 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 FXNQ16595 210 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 NFIL3Q16649 462 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARSHQ5FYA8 562 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF362Q5T0B9 420 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARHGEF16Q5VV41 709 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CIAPIN1Q6FI81 312 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CTRB2Q6GPI1 263 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM122CQ6P4D5 195 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 DRICH1Q6PGQ1 229 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC30A10Q6XR72 485 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 GADL1Q6ZQY3 521 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 FASTKD5Q7L8L6 764 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 EEPD1Q7L9B9 569 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 NEK8Q86SG6 692 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADAMTSL2Q86TH1 951 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 CDR2LQ86X02 465 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PALB2Q86YC2 1186 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 LACC1Q8IV20 430 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PAF1Q8N7H5 531 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 LSMEM1Q8N8F7 131 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 C4orf32Q8N8J7 132 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 ASCC1Q8N9N2 400 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC43A3Q8NBI5 491 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 LEMD2Q8NC56 503 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 EPS8L1Q8TE68 723 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 KBTBD7Q8WVZ9 684 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PYDC1Q8WXC3 89 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 KRT35Q92764 455 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PBXIP1Q96AQ6 731 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 C12orf43Q96C57 262 aaKnown RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 PGBD4Q96DM1 585 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 WNK4Q96J92 1243 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 RTKNQ9BST9 563 aa5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 C2orf49Q9BVC5 232 aaPredicted RBP5.79□□□□□ -1.48
VTI1BP4-201ENST00000427516 NMUR2Q9GZQ4 415 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms