RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 UBTFL6P0CB48 400 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-202ENST00000426778 KCNA4P22459 653 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 ICAM3P32942 547 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 ZNF143P52747 638 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-202ENST00000426778 AP3M2P53677 418 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 ARHGAP8P85298 464 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 TSNAXIP1Q2TAA8 658 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 CCDC14Q49A88 953 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 TTC39BQ5VTQ0 682 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-202ENST00000426778 CDCA2Q69YH5 1023 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-202ENST00000426778 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 C7orf31Q8N865 590 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 HIPK4Q8NE63 616 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 KLRG1Q96E93 195 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 ATXN7L3BQ96GX2 97 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 HPDLQ96IR7 371 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 FDXACB1Q9BRP7 624 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-202ENST00000426778 LHX5Q9H2C1 402 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 ETNK2Q9NVF9 386 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 COX16Q9P0S2 106 aa14.92□□□□□ -0.02
ERCC3-202ENST00000426778 CORO1CQ9ULV4 474 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-202ENST00000426778 C2CD4BA6NLJ0 364 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 ACKR2O00590 384 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 RPL10AP62906 217 aaKnown RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 LRRC74BQ6ZQY2 392 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 LMNTD2Q8IXW0 634 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 FBXO41Q8TF61 875 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 SNRNP25Q9BV90 132 aaKnown RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 PTPRHQ9HD43 1115 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 TMPRSS4Q9NRS4 437 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 PIM2Q9P1W9 311 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 STOML1Q9UBI4 398 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 PLLPQ9Y342 182 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 ANK1P16157 1881 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 POLR2AP24928 1970 aaKnown RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 A6NHS1 94 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 SLC15A5A6NIM6 579 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 ITM2AO43736 263 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 LUC7L3O95232 432 aaKnown RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 SNRPAP09012 282 aaKnown RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 RARBP10826 455 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 VHLP40337 213 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 GTF2A2P52657 109 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 SLC10A2Q12908 348 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 PPP1R26Q5T8A7 1209 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 METTL7BQ6UX53 244 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 RSPH3Q86UC2 560 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 PYROXD2Q8N2H3 581 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 CFAP61Q8NHU2 1237 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 NDRG1Q92597 394 aaKnown RBP14.91□□□□□ -0.02
ERCC3-202ENST00000426778 GPR20Q99678 358 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 BCO2Q9BYV7 579 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 SCN1AP35498 2009 aa14.91□□□□□ -0.02
ERCC3-202ENST00000426778 B4GALT4O60513 344 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 KRT37O76014 449 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 ABCG1P45844 678 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 MBTD1Q05BQ5 628 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 TSHZ1Q6ZSZ6 1077 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-202ENST00000426778 FNIP1Q8TF40 1166 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 CNPY3Q9BT09 278 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 DHX35Q9H5Z1 703 aaKnown RBP14.9□□□□□ -0.02
ERCC3-202ENST00000426778 PPCSQ9HAB8 311 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 PCDH18Q9HCL0 1135 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 EFR3BQ9Y2G0 817 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 SIP14410 1827 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-202ENST00000426778 APOL1O14791 398 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 ZCCHC18P0CG32 403 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 STIP1P31948 543 aaKnown RBP14.9□□□□□ -0.02
ERCC3-202ENST00000426778 KLC1Q07866 573 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 TMEM62Q0P6H9 643 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 MXD4Q14582 209 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-202ENST00000426778 GLRA4Q5JXX5 417 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 ISLR2Q6UXK2 745 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 DENND5BQ6ZUT9 1274 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 CHSY1Q86X52 802 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 HACE1Q8IYU2 909 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 PPP1R14CQ8TAE6 165 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 AGR3Q8TD06 166 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 PACSIN3Q9UKS6 424 aa14.9□□□□□ -0.02
ERCC3-202ENST00000426778 LGR5O75473 907 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 PROZP22891 400 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SESN2P58004 480 aaPredicted RBP14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SLC25A3Q00325 362 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SLC10A6Q3KNW5 377 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 VWA5B1Q5TIE3 1220 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ATG14Q6ZNE5 492 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.89□□□□□ -0.03
ERCC3-202ENST00000426778 DNERQ8NFT8 737 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF398Q8TD17 642 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 CCDC124Q96CT7 223 aaKnown RBP14.89□□□□□ -0.03
ERCC3-202ENST00000426778 AKT3Q9Y243 479 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 WDR27A2RRH5 827 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ZMPSTE24O75844 475 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms