RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 MYRFLQ96LU7 910 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 DDIT4Q9NX09 232 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 RRN3Q9NYV6 651 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 CDC23Q9UJX2 597 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 MRFAP1Q9Y605 127 aa16.46■□□□□ 0.23
SCRN1-205ENST00000425819 PLXNA3P51805 1871 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 CEP104O60308 925 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 RFPL2O75678 378 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 ZDHHC11BP0C7U3 371 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 RALAP11233 206 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 NRIP1P48552 1158 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 PSEN1P49768 467 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 KCNT1Q5JUK3 1230 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 AADACL2Q6P093 401 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 BNIPLQ7Z465 357 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 FAM131BQ86XD5 332 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 PDZD8Q8NEN9 1154 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 CASP10Q92851 521 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 TRMT2BQ96GJ1 504 aaKnown RBP16.45■□□□□ 0.22
SCRN1-205ENST00000425819 PLEKHA4Q9H4M7 779 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 ZNF334Q9HCZ1 680 aaPredicted RBP16.45■□□□□ 0.22
SCRN1-205ENST00000425819 PIGVQ9NUD9 493 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCRN1-205ENST00000425819 CLIC5Q9NZA1 410 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 SFMBT1Q9UHJ3 866 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 ASB3Q9Y575 518 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 HCFC2Q9Y5Z7 792 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 MYO16Q9Y6X6 1858 aa16.45■□□□□ 0.22
SCRN1-205ENST00000425819 ZMYND10O75800 440 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 ENDOD1O94919 500 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 TBX18O95935 607 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 KRT1P04264 644 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 KRT7P08729 469 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
SCRN1-205ENST00000425819 CYP4V2Q6ZWL3 525 aaPredicted RBP16.44■□□□□ 0.22
SCRN1-205ENST00000425819 HS6ST3Q8IZP7 471 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 ELMOD1Q8N336 334 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 OVCA2Q8WZ82 227 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 HSPH1Q92598 858 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 MRPL38Q96DV4 380 aaKnown RBP16.44■□□□□ 0.22
SCRN1-205ENST00000425819 MS4A14Q96JA4 679 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 PBKQ96KB5 322 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 NCAPGQ9BPX3 1015 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 SMOC2Q9H3U7 446 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 ZNF576Q9H609 170 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCRN1-205ENST00000425819 SMARCAL1Q9NZC9 954 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 TRPM5Q9NZQ8 1165 aa16.44■□□□□ 0.22
SCRN1-205ENST00000425819 LAMA2P24043 3122 aaKnown RBP16.44■□□□□ 0.22
SCRN1-205ENST00000425819 ZNF840PA6NDX5 716 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 PI4K2BG5E9Z4 385 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 MDM4O15151 490 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 MSI1O43347 362 aaKnown RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 TADA3O75528 432 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 C1RP00736 705 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 RARAP10276 462 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 PYGMP11217 842 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 EFEMP1Q12805 493 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 DUSP6Q16828 381 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 C10orf120Q5SQS8 335 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 ZNF697Q5TEC3 545 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 CREG2Q8IUH2 290 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 CCDC185Q8N715 623 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 RNF25Q96BH1 459 aaPredicted RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 CARD9Q9H257 536 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 CCSER2Q9H7U1 834 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 GPATCH2LQ9NWQ4 482 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 DDX56Q9NY93 547 aaKnown RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 UXTQ9UBK9 157 aaPredicted RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 COLQQ9Y215 455 aaPredicted RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 TLR5O60602 858 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 F9P00740 461 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 IGLV3-25P01717 112 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 GBP1P32455 592 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 TUBB2AQ13885 445 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 LLGL1Q15334 1064 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 ODF2Q5BJF6 829 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 SEL1L2Q5TEA6 688 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 MSANTD2Q6P1R3 559 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 CCDC50Q8IVM0 306 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 RAPGEF5Q92565 580 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 PGAP3Q96FM1 320 aaPredicted RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 CORO1BQ9BR76 489 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 SNRNP25Q9BV90 132 aaKnown RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 TUBB2BQ9BVA1 445 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 IGFLR1Q9H665 355 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 IL21Q9HBE4 155 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 WDR6Q9NNW5 1121 aaKnown RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 OLA1Q9NTK5 396 aaKnown RBP16.43■□□□□ 0.22
SCRN1-205ENST00000425819 RASAL2Q9UJF2 1139 aa16.43■□□□□ 0.22
SCRN1-205ENST00000425819 GREB1Q4ZG55 1949 aa16.42■□□□□ 0.22
SCRN1-205ENST00000425819 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
SCRN1-205ENST00000425819 LRRD1A4D1F6 860 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms