RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TPGS1Q6ZTW0 290 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 LPCAT2Q7L5N7 544 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 CCDC186Q7Z3E2 898 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 FBXL13Q8NEE6 735 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 XPO6Q96QU8 1125 aaKnown RBP19.46■□□□□ 0.71
SREBF1-206ENST00000423161 LSM14BQ9BX40 385 aaKnown RBP19.46■□□□□ 0.71
SREBF1-206ENST00000423161 WDR35Q9P2L0 1181 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 DNMT3LQ9UJW3 386 aa19.46■□□□□ 0.71
SREBF1-206ENST00000423161 ADAMTS9Q9P2N4 1935 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 C4orf47A7E2U8 309 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 PATE3B3GLJ2 98 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 KHNYNO15037 678 aaKnown RBP19.45■□□□□ 0.7
SREBF1-206ENST00000423161 HOXB2P14652 356 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 WASP42768 502 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 PLA2G4AP47712 749 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 PSEN1P49768 467 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 MCCD1P59942 119 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-206ENST00000423161 PNOCQ13519 176 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 BYSLQ13895 437 aaKnown RBP19.45■□□□□ 0.7
SREBF1-206ENST00000423161 N4BP2L1Q5TBK1 243 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-206ENST00000423161 SCD5Q86SK9 330 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 TADA2BQ86TJ2 420 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 TTC39CQ8N584 583 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 FRMD1Q8N878 549 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 PIGKQ92643 395 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 HEXIM2Q96MH2 286 aaKnown RBP19.45■□□□□ 0.7
SREBF1-206ENST00000423161 MARK1Q9P0L2 795 aa19.45■□□□□ 0.7
SREBF1-206ENST00000423161 ASCC3Q8N3C0 2202 aaKnown RBP19.44■□□□□ 0.7
SREBF1-206ENST00000423161 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 CETN3O15182 167 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 STX10O60499 249 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 RALAP11233 206 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 NTSR1P30989 418 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 MAP7D1Q3KQU3 841 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 EGFLAMQ63HQ2 1017 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 Q6ZNB5 142 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 ARMCX6Q7L4S7 300 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 MIB1Q86YT6 1006 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 TMEFF1Q8IYR6 380 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 SLC4A11Q8NBS3 891 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 ARID3AQ99856 593 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 CISHQ9NSE2 258 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 RAB20Q9NX57 234 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 MBD1Q9UIS9 605 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-206ENST00000423161 HCN2Q9UL51 889 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 STARD13Q9Y3M8 1113 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 USP3Q9Y6I4 520 aa19.44■□□□□ 0.7
SREBF1-206ENST00000423161 KMT2BQ9UMN6 2715 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-206ENST00000423161 STC2O76061 302 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 KCNK5O95279 499 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 GABRG2P18507 467 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 DGKGP49619 791 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 TCERG1LQ5VWI1 586 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 DAB2IPQ5VWQ8 1189 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 TOGARAM2Q6ZUX3 1019 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 ZNF276Q8N554 614 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 BHMTQ93088 406 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 TMEM176AQ96HP8 235 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 CDK5RAP1Q96SZ6 601 aaKnown RBP19.43■□□□□ 0.7
SREBF1-206ENST00000423161 TMEM9BQ9NQ34 198 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 RMND1Q9NWS8 449 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 CLIC5Q9NZA1 410 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 RASAL2Q9UJF2 1139 aa19.43■□□□□ 0.7
SREBF1-206ENST00000423161 PRRT4C9JH25 899 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 PMLP29590 882 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 PRCPP42785 496 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 PTGER3P43115 390 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 RAD23BP54727 409 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 IRX4P78413 519 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 DCAF17Q5H9S7 520 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-206ENST00000423161 SDE2Q6IQ49 451 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 PSAPL1Q6NUJ1 521 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 CHPFQ8IZ52 775 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 TATDN2Q93075 761 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 ACOX2Q99424 681 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 TSG101Q99816 390 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 PLK2Q9NYY3 685 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 EVLQ9UI08 416 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-206ENST00000423161 ANGPTL2Q9UKU9 493 aa19.42■□□□□ 0.7
SREBF1-206ENST00000423161 A0A1W2PQF6 199 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 NOVA1P51513 510 aaKnown RBP19.41■□□□□ 0.7
SREBF1-206ENST00000423161 EFEMP1Q12805 493 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 CBWD6Q4V339 395 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 TRIM61Q5EBN2 209 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 CBWD3Q5JTY5 395 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 SPDYCQ5MJ68 293 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 CBWD5Q5RIA9 395 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-206ENST00000423161 LYSMD4Q5XG99 296 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 ARHGAP17Q68EM7 881 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 SYT12Q8IV01 421 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 FMR1NBQ8N0W7 255 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-206ENST00000423161 FAM124BQ9H5Z6 455 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-206ENST00000423161 CALCOCO1Q9P1Z2 691 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 ZNF510Q9Y2H8 683 aa19.41■□□□□ 0.7
SREBF1-206ENST00000423161 ATXN2Q99700 1313 aaKnown RBP19.41■□□□□ 0.7
SREBF1-206ENST00000423161 CDX4O14627 284 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-206ENST00000423161 SLC16A3O15427 465 aaKnown RBP19.4■□□□□ 0.7
SREBF1-206ENST00000423161 ZBTB24O43167 697 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms