RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PPP2R5EQ16537 467 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 DCAF6Q58WW2 860 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 ACBD5Q5T8D3 534 aaPredicted RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 OTUD1Q5VV17 481 aaPredicted RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 HFE2Q6ZVN8 426 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 ITIH5Q86UX2 942 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 ATXN2LQ8WWM7 1075 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 PSMG2Q969U7 264 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 RBM41Q96IZ5 413 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLITRK1Q96PX8 696 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 SEPT5Q99719 369 aaPredicted RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 SMOC2Q9H3U7 446 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 CYP4F11Q9HBI6 524 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 ALG13Q9NP73 1137 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 TLR8Q9NR97 1041 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 OLA1Q9NTK5 396 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 LMCD1Q9NZU5 365 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 YIPF1Q9Y548 306 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 SPTBN5Q9NRC6 3674 aaKnown RBP14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 SOBPA7XYQ1 873 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 TMEM110-MUSTN1A8MSY1 372 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 CAPN9O14815 690 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 GRM6O15303 877 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 PRPSAP2O60256 369 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 GRAP2O75791 330 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 NCAM1P13591 858 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 PFKLP17858 780 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 CXCR3P49682 368 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 GPR15P49685 360 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 ARSEP51690 589 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 EPHB3P54753 998 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 USP46P62068 366 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 VEPH1Q14D04 833 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 PDK2Q15119 407 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 C15orf59Q2T9L4 293 aaPredicted RBP14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 TADA2BQ86TJ2 420 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 AUTS2Q8WXX7 1259 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 WDR6Q9NNW5 1121 aaKnown RBP14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 ENTPD7Q9NQZ7 604 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 RCOR3Q9P2K3 495 aaPredicted RBP14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 NAALADL1Q9UQQ1 740 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 INSL5Q9Y5Q6 135 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 MTCH2Q9Y6C9 303 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 PLXNA3P51805 1871 aa14.87□□□□□ -0.03
SHMT1P1-201ENST00000419974 C3orf70A6NLC5 250 aaPredicted RBP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 PGRMC1O00264 195 aaKnown RBP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 LPXNO60711 386 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 SRGAP2O75044 1071 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLU7O95391 586 aaKnown RBP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 GLUD1P00367 558 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 PYGMP11217 842 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 IL1R2P27930 398 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 GBP1P32455 592 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 GTF2F1P35269 517 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 CETN2P41208 172 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 TAF10Q12962 218 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 DPYSL2Q16555 572 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 BRMS1LQ5PSV4 323 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 ERMARDQ5T6L9 678 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 BTBD8Q5XKL5 378 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 CPNE8Q86YQ8 564 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 MAIP1Q8WWC4 291 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 ARNTL2Q8WYA1 636 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 NDRG1Q92597 394 aaKnown RBP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 COL25A1Q9BXS0 654 aaPredicted RBP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 ADAM33Q9BZ11 813 aa14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHMT1P1-201ENST00000419974 PLXNA4Q9HCM2 1894 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 EPOPA6NHQ4 379 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 HIDE1A8MVS5 230 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 EFCAB8A8MWE9 144 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 M0QYT0 321 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 PRRG1O14668 218 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZNF185O15231 689 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 HNRNPA1P09651 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 RARAP10276 462 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 RALAP11233 206 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 TCF4P15884 667 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 KLRC2P26717 231 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 CXCR5P32302 372 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 MARCKSL1P49006 195 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 KPNA1P52294 538 aaPredicted RBP14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 ATP11AP98196 1134 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 KLF1Q13351 362 aaPredicted RBP14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 GPM6BQ13491 265 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 PPP2R5DQ14738 602 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 PABPC1LQ4VXU2 614 aaKnown RBP14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 SH3PXD2AQ5TCZ1 1133 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 SEL1L2Q5TEA6 688 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 MAP7D3Q8IWC1 876 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 KREMEN2Q8NCW0 462 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 DQX1Q8TE96 717 aaKnown RBP14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLC22A17Q8WUG5 538 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 FBXO32Q969P5 355 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 FAF2Q96CS3 445 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 SERPINB11Q96P15 392 aa14.85□□□□□ -0.03
SHMT1P1-201ENST00000419974 CDCA3Q99618 268 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms