RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 FAM172AQ8WUF8 416 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 RNF34Q969K3 372 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 MYRFLQ96LU7 910 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 SERPINB11Q96P15 392 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 WDR24Q96S15 920 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 TBCBQ99426 244 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 NPY6RQ99463 290 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 GAS2L1Q99501 681 aaPredicted RBP8.77□□□□□ -1.01
RBM39-208ENST00000416108 CORO1BQ9BR76 489 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 DDX23Q9BUQ8 820 aaKnown RBP8.77□□□□□ -1.01
RBM39-208ENST00000416108 TRIM7Q9C029 511 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 PRDM12Q9H4Q4 367 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 DDIT4Q9NX09 232 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 HYOU1Q9Y4L1 999 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 DOCK4Q8N1I0 1966 aa8.77□□□□□ -1.01
RBM39-208ENST00000416108 PRRC2BQ5JSZ5 2229 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 TRIOBPQ9H2D6 2365 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 CCDC195A0A1B0GUA6 201 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 ENC1O14682 589 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 NCK2O43639 380 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 TLR5O60602 858 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 URI1O94763 535 aaPredicted RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 TRUB2O95900 331 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 POU2F2P09086 479 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 HMGA1P17096 107 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 TCP1P17987 556 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 CTNNA2P26232 953 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 CTNNA1P35221 906 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 PCK1P35558 622 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 ATP5C1P36542 298 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 KPNA1P52294 538 aaPredicted RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 EFEMP1Q12805 493 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 ARHGAP15Q53QZ3 475 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 HECTD3Q5T447 861 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 TRNP1Q6NT89 227 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 MSANTD2Q6P1R3 559 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 EP400NLQ6ZTU2 488 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 BHLHA9Q7RTU4 235 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 SCD5Q86SK9 330 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 TAC4Q86UU9 113 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 SMG7Q92540 1137 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.016e-12■■■□□ 18.1
RBM39-208ENST00000416108 PRKD2Q9BZL6 878 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 ATXN3LQ9H3M9 355 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 SMOC2Q9H3U7 446 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 ZWILCHQ9H900 591 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 NMUR1Q9HB89 426 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 TRPC7Q9HCX4 862 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.76□□□□□ -1.01
RBM39-208ENST00000416108 DDX56Q9NY93 547 aaKnown RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.76□□□□□ -1.01
RBM39-208ENST00000416108 PCSK1NQ9UHG2 260 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 USP18Q9UMW8 372 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 PACSIN2Q9UNF0 486 aaPredicted RBP8.76□□□□□ -1.01
RBM39-208ENST00000416108 SAR1BQ9Y6B6 198 aa8.76□□□□□ -1.01
RBM39-208ENST00000416108 SHROOM3Q8TF72 1996 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 DENND4AQ7Z401 1863 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 TRAV19A0A0A6YYK7 116 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 SLC12A8A0AV02 714 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 ZNF840PA6NDX5 716 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 KCNK3O14649 394 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 ZNF197O14709 1029 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 IRAK2O43187 625 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 LRCH4O75427 683 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 RFPL2O75678 378 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 APOEP02649 317 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 KRT1P04264 644 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 ATP1A1P05023 1023 aaKnown RBP8.75□□□□□ -1.01
RBM39-208ENST00000416108 ZDHHC11BP0C7U3 371 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 SLC2A3P11169 496 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 MBL2P11226 248 aaPredicted RBP8.75□□□□□ -1.01
RBM39-208ENST00000416108 PFKLP17858 780 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 IGFBP4P22692 258 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 DDX6P26196 483 aaKnown RBP eCLIP8.75□□□□□ -1.01
RBM39-208ENST00000416108 MIPP30301 263 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 TUBP50607 506 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 AIF1P55008 147 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 RWDD2BP57060 319 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 TBX4P57082 545 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 MTA1Q13330 715 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 KRT81Q14533 505 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 EFHC2Q5JST6 749 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 BRMS1LQ5PSV4 323 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 CCDC181Q5TID7 509 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 LRRC38Q5VT99 294 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 SYPL2Q5VXT5 272 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 CCDC50Q8IVM0 306 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 ZNF276Q8N554 614 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 EFHBQ8N7U6 833 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 PGAP3Q96FM1 320 aaPredicted RBP8.75□□□□□ -1.01
RBM39-208ENST00000416108 RBM41Q96IZ5 413 aaKnown RBP8.75□□□□□ -1.01
RBM39-208ENST00000416108 PBKQ96KB5 322 aa8.75□□□□□ -1.01
RBM39-208ENST00000416108 ZNF334Q9HCZ1 680 aaPredicted RBP8.75□□□□□ -1.01
RBM39-208ENST00000416108 MARCH2Q9P0N8 246 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms