RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 DNAJC7Q99615 494 aa17.24■□□□□ 0.35
LINC00398-201ENST00000414407 FAM83CQ9BQN1 747 aa17.24■□□□□ 0.35
LINC00398-201ENST00000414407 SMPD4Q9NXE4 827 aa17.24■□□□□ 0.35
LINC00398-201ENST00000414407 MARCH2Q9P0N8 246 aa17.24■□□□□ 0.35
LINC00398-201ENST00000414407 NUDT5Q9UKK9 219 aa17.24■□□□□ 0.35
LINC00398-201ENST00000414407 SLC9A3R1O14745 358 aaPredicted RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 SERPING1P05155 500 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 KPNA1P52294 538 aaPredicted RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 MLLT6P55198 1093 aaPredicted RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 GSCP56915 257 aaPredicted RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 EFEMP1Q12805 493 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 TBX2Q13207 712 aaPredicted RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 FAM183BPQ6ZVS7 135 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 HTR3DQ70Z44 454 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 ZNF571Q7Z3V5 609 aaPredicted RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 XYLT1Q86Y38 959 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 OR8K1Q8NGG5 319 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 OLIG1Q8TAK6 271 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 EDEM1Q92611 657 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 OTUB2Q96DC9 234 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 SLC2A13Q96QE2 648 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 SMOC2Q9H3U7 446 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 GKN1Q9NS71 199 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 SEPT11Q9NVA2 429 aaKnown RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 CFAP97Q9P2B7 532 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 WDR35Q9P2L0 1181 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 TBC1D14Q9P2M4 693 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 RASAL2Q9UJF2 1139 aa17.23■□□□□ 0.35
LINC00398-201ENST00000414407 HBS1LQ9Y450 684 aaKnown RBP17.23■□□□□ 0.35
LINC00398-201ENST00000414407 HELZP42694 1942 aaKnown RBP17.22■□□□□ 0.35
LINC00398-201ENST00000414407 DLL1O00548 723 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 CAPN9O14815 690 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 MDM4O15151 490 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 CALB1P05937 261 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 GZMAP12544 262 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 NCAM1P13591 858 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 GLULP15104 373 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
LINC00398-201ENST00000414407 ACAD10Q6JQN1 1059 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 ARCQ7LC44 396 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 MIB1Q86YT6 1006 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 CNGA4Q8IV77 575 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 SLC30A5Q8TAD4 765 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 PIWIL1Q96J94 861 aaKnown RBP17.22■□□□□ 0.35
LINC00398-201ENST00000414407 VCPIP1Q96JH7 1222 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 DUS2Q9NX74 493 aaKnown RBP17.22■□□□□ 0.35
LINC00398-201ENST00000414407 LSM7Q9UK45 103 aaKnown RBP17.22■□□□□ 0.35
LINC00398-201ENST00000414407 SH3BP1Q9Y3L3 701 aa17.22■□□□□ 0.35
LINC00398-201ENST00000414407 GREM1O60565 184 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 MFAP3LO75121 409 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 SKILP12757 684 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 IFNAR2P48551 515 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 PTP4A2Q12974 167 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 NNTQ13423 1086 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 TAF5Q15542 800 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 TSR1Q2NL82 804 aaKnown RBP17.21■□□□□ 0.35
LINC00398-201ENST00000414407 TDRD12Q587J7 1177 aaKnown RBP17.21■□□□□ 0.35
LINC00398-201ENST00000414407 MMS22LQ6ZRQ5 1243 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 TMC6Q7Z403 805 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 CSGALNACT1Q8TDX6 532 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 PLD4Q96BZ4 506 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 ASIC4Q96FT7 647 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 MSANTD3Q96H12 275 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 SERPINB11Q96P15 392 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 DCLK3Q9C098 648 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 TMEM51Q9NW97 253 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 ZNHIT6Q9NWK9 470 aaKnown RBP17.21■□□□□ 0.35
LINC00398-201ENST00000414407 RRN3Q9NYV6 651 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 ADAM22Q9P0K1 906 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 FBXL21Q9UKT6 434 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 NAALADL1Q9UQQ1 740 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 ZNF510Q9Y2H8 683 aa17.21■□□□□ 0.35
LINC00398-201ENST00000414407 KIF26AQ9ULI4 1882 aaPredicted RBP17.2■□□□□ 0.34
LINC00398-201ENST00000414407 SLC12A8A0AV02 714 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 AKR1B15C9JRZ8 316 aaPredicted RBP17.2■□□□□ 0.34
LINC00398-201ENST00000414407 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00398-201ENST00000414407 DAB1O75553 588 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 STC2O76061 302 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 PRKCQQ04759 706 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 RING1Q06587 406 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 RUNX3Q13761 415 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 TRIP4Q15650 581 aaPredicted RBP17.2■□□□□ 0.34
LINC00398-201ENST00000414407 EML3Q32P44 896 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 ITPRIPL2Q3MIP1 535 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 SLC44A4Q53GD3 710 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 FAM102AQ5T9C2 384 aaPredicted RBP17.2■□□□□ 0.34
LINC00398-201ENST00000414407 SYPL2Q5VXT5 272 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 C1orf228Q6PIY5 440 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 Q6ZNB5 142 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 MON1BQ7L1V2 547 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 DQX1Q8TE96 717 aaKnown RBP17.2■□□□□ 0.34
LINC00398-201ENST00000414407 ZFYVE19Q96K21 471 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 C11orf70Q9BRQ4 267 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 EPHX3Q9H6B9 360 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 ABHD10Q9NUJ1 306 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 SFMBT1Q9UHJ3 866 aa17.2■□□□□ 0.34
LINC00398-201ENST00000414407 WNT6Q9Y6F9 365 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms