RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SCFD1Q8WVM8 642 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 TOE1Q96GM8 510 aaKnown RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 KCNK16Q96T55 309 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 BBS2Q9BXC9 721 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 GAREM1Q9H706 876 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 TM7SF3Q9NS93 570 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 IL37Q9NZH6 218 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 CHORDC1Q9UHD1 332 aaPredicted RBP10.12□□□□□ -0.79
RFFL-203ENST00000413582 PCDHB13Q9Y5F0 798 aa10.12□□□□□ -0.79
RFFL-203ENST00000413582 MUC22E2RYF6 1773 aaPredicted RBP10.11□□□□□ -0.79
RFFL-203ENST00000413582 ZNF233A6NK53 670 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 FLRT2O43155 660 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 STX6O43752 255 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 C1QL1O75973 258 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 PRPF6O94906 941 aaKnown RBP10.11□□□□□ -0.79
RFFL-203ENST00000413582 PRB1P04280 392 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 SYT1P21579 422 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 MATKP42679 507 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 PGFP49763 221 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 SF3A1Q15459 793 aaKnown RBP10.11□□□□□ -0.79
RFFL-203ENST00000413582 SURF1Q15526 300 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 DBX2Q6ZNG2 339 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 HTR3DQ70Z44 454 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 P2RY11Q96G91 374 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 XPO6Q96QU8 1125 aaKnown RBP10.11□□□□□ -0.79
RFFL-203ENST00000413582 GPR174Q9BXC1 333 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 MKRN2Q9H000 416 aaKnown RBP10.11□□□□□ -0.79
RFFL-203ENST00000413582 MIR1-1HGQ9H1L0 117 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 PCDHGB2Q9Y5G2 931 aa10.11□□□□□ -0.79
RFFL-203ENST00000413582 ATP8B3O60423 1300 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 VPS37CA5D8V6 355 aaPredicted RBP10.1□□□□□ -0.79
RFFL-203ENST00000413582 FAM149AA5PLN7 773 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 TRABD2BA6NFA1 517 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 A8MXQ7 604 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 KCNJ18B7U540 433 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 BCAT2O15382 392 aaPredicted RBP10.1□□□□□ -0.79
RFFL-203ENST00000413582 TLR5O60602 858 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 CST3P01034 146 aaPredicted RBP10.1□□□□□ -0.79
RFFL-203ENST00000413582 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 CISD3P0C7P0 127 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 IDEP14735 1019 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 DGKGP49619 791 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 TPMTP51580 245 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 TNNC1P63316 161 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 STARD3Q14849 445 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 HLA-BQ31612 363 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 WDR72Q3MJ13 1102 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 DCAF12L1Q5VU92 463 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 IL27RAQ6UWB1 636 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 TPGS1Q6ZTW0 290 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 PAQR9Q6ZVX9 377 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 SV2BQ7L1I2 683 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 GALNT15Q8N3T1 639 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 C1orf216Q8TAB5 229 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 SMARCD1Q96GM5 515 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 UBL7Q96S82 380 aaPredicted RBP10.1□□□□□ -0.79
RFFL-203ENST00000413582 CGRRF1Q99675 332 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 CDC6Q99741 560 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 KLF16Q9BXK1 252 aaPredicted RBP10.1□□□□□ -0.79
RFFL-203ENST00000413582 NACA2Q9H009 215 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 XYLT2Q9H1B5 865 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 PRDM16Q9HAZ2 1276 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 DMAP1Q9NPF5 467 aaPredicted RBP10.1□□□□□ -0.79
RFFL-203ENST00000413582 KRT82Q9NSB4 513 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 HSPBP1Q9NZL4 362 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 WDR35Q9P2L0 1181 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 MTMR6Q9Y217 621 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 BTBD3Q9Y2F9 522 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 SLCO1B1Q9Y6L6 691 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 STON1Q9Y6Q2 735 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 COL6A6A6NMZ7 2263 aa10.1□□□□□ -0.79
RFFL-203ENST00000413582 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 STAU1O95793 577 aaKnown RBP10.09□□□□□ -0.79
RFFL-203ENST00000413582 TBX18O95935 607 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 IGLV3-19P01714 112 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 DLATP10515 647 aaKnown RBP10.09□□□□□ -0.79
RFFL-203ENST00000413582 HOXD13P35453 343 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 IL12RB1P42701 662 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 ABCG1P45844 678 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 C19orf57Q0VDD7 668 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 ENPP2Q13822 863 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
RFFL-203ENST00000413582 PTPRNQ16849 979 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 RRAGBQ5VZM2 374 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 Q6ZNB5 142 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 CLEC17AQ6ZS10 378 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 BRAPQ7Z569 592 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 ZMIZ2Q8NF64 920 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 BHMTQ93088 406 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 GZF1Q9H116 711 aaPredicted RBP10.09□□□□□ -0.79
RFFL-203ENST00000413582 ZSCAN16Q9H4T2 348 aaPredicted RBP10.09□□□□□ -0.79
RFFL-203ENST00000413582 SMYD3Q9H7B4 428 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 ITM2CQ9NQX7 267 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 PANK4Q9NVE7 773 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 COMMD8Q9NX08 183 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 CCDC39Q9UFE4 941 aa10.09□□□□□ -0.79
RFFL-203ENST00000413582 EIF2B4Q9UI10 523 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms