RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 GLI1P08151 1106 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 IRF1P10914 325 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 CASP14P31944 242 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 IFNAR2P48551 515 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 COG7P83436 770 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 CENPCQ03188 943 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 KLHL30Q0D2K2 578 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 PDGFRLQ15198 375 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 CLEC16AQ2KHT3 1053 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 EFHC1Q5JVL4 640 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 OR6B2Q6IFH4 312 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 TOGARAM2Q6ZUX3 1019 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 OLIG1Q8TAK6 271 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 HAUS4Q9H6D7 363 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 POPDC2Q9HBU9 364 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 ARHGEF3Q9NR81 526 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 SEPT11Q9NVA2 429 aaKnown RBP21.23■□□□□ 0.99
PTCD3-202ENST00000409326 DUS2Q9NX74 493 aaKnown RBP21.23■□□□□ 0.99
PTCD3-202ENST00000409326 CA14Q9ULX7 337 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 SH3BP1Q9Y3L3 701 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 WNT6Q9Y6F9 365 aa21.23■□□□□ 0.99
PTCD3-202ENST00000409326 SLC9A3R1O14745 358 aaPredicted RBP21.22■□□□□ 0.99
PTCD3-202ENST00000409326 HSF2BPO75031 334 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 NCAM1P13591 858 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 MMP8P22894 467 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 YWHAZP63104 245 aaKnown RBP21.22■□□□□ 0.99
PTCD3-202ENST00000409326 SLC6A3Q01959 620 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 IER5LQ5T953 404 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 TRIM68Q6AZZ1 485 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 SLC26A9Q7LBE3 791 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 XYLT1Q86Y38 959 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 SIX5Q8N196 739 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 CSGALNACT1Q8TDX6 532 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 HPS4Q9NQG7 708 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 HEBP1Q9NRV9 189 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 GTSE1Q9NYZ3 720 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 F5P12259 2224 aa21.22■□□□□ 0.99
PTCD3-202ENST00000409326 MIA3Q5JRA6 1907 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 FAM170AA1A519 330 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 KRBA1A5PL33 1030 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 CAPN9O14815 690 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 GREM1O60565 184 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 STC2O76061 302 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 TNFAIP3P21580 790 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 SCNN1AP37088 669 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 NSFP46459 744 aaKnown RBP21.21■□□□□ 0.99
PTCD3-202ENST00000409326 PRKCQQ04759 706 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 TNK2Q07912 1038 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 TAF5Q15542 800 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 MLF2Q15773 248 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-202ENST00000409326 EML3Q32P44 896 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 SLC44A4Q53GD3 710 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 MMS22LQ6ZRQ5 1243 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 HTR3DQ70Z44 454 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 ZNF571Q7Z3V5 609 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-202ENST00000409326 PHF13Q86YI8 300 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-202ENST00000409326 SLC30A5Q8TAD4 765 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 ATP2A3Q93084 1043 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 WBP2Q969T9 261 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 EBF3Q9H4W6 596 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 TBC1D14Q9P2M4 693 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 SFMBT1Q9UHJ3 866 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 LSM7Q9UK45 103 aaKnown RBP21.21■□□□□ 0.99
PTCD3-202ENST00000409326 NAALADL1Q9UQQ1 740 aa21.21■□□□□ 0.99
PTCD3-202ENST00000409326 BZW2Q9Y6E2 419 aaKnown RBP21.21■□□□□ 0.99
PTCD3-202ENST00000409326 SLC12A8A0AV02 714 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 SCAMP3O14828 347 aaKnown RBP21.2■□□□□ 0.98
PTCD3-202ENST00000409326 TPM1P09493 284 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 SKILP12757 684 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 ARSAP15289 507 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 MLLT6P55198 1093 aaPredicted RBP21.2■□□□□ 0.98
PTCD3-202ENST00000409326 RUNX3Q13761 415 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 ITPRIPL2Q3MIP1 535 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 C2CD6Q53TS8 623 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 HGSNATQ68CP4 663 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 DQX1Q8TE96 717 aaKnown RBP21.2■□□□□ 0.98
PTCD3-202ENST00000409326 PLD4Q96BZ4 506 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 OTUB2Q96DC9 234 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 SLC2A13Q96QE2 648 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 C11orf70Q9BRQ4 267 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 C1QTNF1Q9BXJ1 281 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 C11orf16Q9NQ32 467 aa21.2■□□□□ 0.98
PTCD3-202ENST00000409326 HBS1LQ9Y450 684 aaKnown RBP21.2■□□□□ 0.98
PTCD3-202ENST00000409326 DAB1O75553 588 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 SERPING1P05155 500 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 HMBSP08397 361 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 GLULP15104 373 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
PTCD3-202ENST00000409326 ZNF75DP51815 510 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 PTP4A2Q12974 167 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 ARID5BQ14865 1188 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 TDRD12Q587J7 1177 aaKnown RBP21.19■□□□□ 0.98
PTCD3-202ENST00000409326 FAM102AQ5T9C2 384 aaPredicted RBP21.19■□□□□ 0.98
PTCD3-202ENST00000409326 SYPL2Q5VXT5 272 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 PPP1R2P3Q6NXS1 205 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 BBS7Q8IWZ6 715 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 CPA6Q8N4T0 437 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 MSANTD3Q96H12 275 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 MRFAP1L1Q96HT8 127 aa21.19■□□□□ 0.98
PTCD3-202ENST00000409326 SHDQ96IW2 340 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms