RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 EFEMP1Q12805 493 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 CSRP2Q16527 193 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 Q6ZNB5 142 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 LMO3Q8TAP4 145 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 UBA3Q8TBC4 463 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 BBS2Q9BXC9 721 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 NCOR2Q9Y618 2525 aa20.26■□□□□ 0.83
SMARCB1-204ENST00000407422 BICDL2A1A5D9 508 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 PRR5-ARHGAP8B1AHC4 643 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 PMM2O15305 246 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 ADAM23O75077 832 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 KLKB1P03952 638 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 TYRP14679 529 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 BCAT1P54687 386 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 SLC8A3P57103 927 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 YWHAEP62258 255 aaKnown RBP20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 ARHGAP8P85298 464 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 FOXK2Q01167 660 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 PLK5Q496M5 336 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 FOXR2Q6PJQ5 311 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 TMEM270Q6UE05 265 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 PRR23CQ6ZRP0 262 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 TADA2BQ86TJ2 420 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 RASSF3Q86WH2 238 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 MDGA1Q8NFP4 955 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 BHMTQ93088 406 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 P2RY11Q96G91 374 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 ZC3H10Q96K80 434 aaKnown RBP20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 NT5C1BQ96P26 610 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 ULBP1Q9BZM6 244 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 DUSP15Q9H1R2 295 aaPredicted RBP20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 RASAL2Q9UJF2 1139 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 HCN2Q9UL51 889 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 THADAQ6YHU6 1953 aa20.25■□□□□ 0.83
SMARCB1-204ENST00000407422 RNF225M0QZC1 329 aaPredicted RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 O00370 1275 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 XPO1O14980 1071 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 ZBED1O96006 694 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 HMBSP08397 361 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 ATXN1P54253 815 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 YWHAGP61981 247 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 PAK1Q13153 545 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 CAMK4Q16566 473 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 PM20D1Q6GTS8 502 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 BHLHA9Q7RTU4 235 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 PPM1KQ8N3J5 372 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 TERB1Q8NA31 727 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 LOXL4Q96JB6 756 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 DNAJC17Q9NVM6 304 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 HESX1Q9UBX0 185 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 CDV3Q9UKY7 258 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 CACNG3O60359 315 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 GDF9O60383 454 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 EPN2O95208 641 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 CALCAP01258 141 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 VDRP11473 427 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 BST2Q10589 180 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 KCNH2Q12809 1159 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 C10orf76Q5T2E6 689 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 RRAGAQ7L523 313 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 TRIM59Q8IWR1 403 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 CNOT6LQ96LI5 555 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 CDK5RAP1Q96SZ6 601 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 ZSWIM1Q9BR11 485 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 SRRTQ9BXP5 876 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 PLK2Q9NYY3 685 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 MARK1Q9P0L2 795 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 PCDHB4Q9Y5E5 795 aa20.24■□□□□ 0.83
SMARCB1-204ENST00000407422 NUP205Q92621 2012 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 ADIGQ0VDE8 80 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 SF3A2Q15428 464 aaKnown RBP20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 HSF5Q4G112 596 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 PKDCCQ504Y2 493 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 GRAMD4Q6IC98 578 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 TOGARAM2Q6ZUX3 1019 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 RSRC2Q7L4I2 434 aaKnown RBP20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 ARHGEF19Q8IW93 802 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 ARHGAP18Q8N392 663 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 ZNF513Q8N8E2 541 aaPredicted RBP20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 SMOC1Q9H4F8 434 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 LRRC4Q9HBW1 653 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 MARCH2Q9P0N8 246 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 WDR35Q9P2L0 1181 aa20.23■□□□□ 0.83
SMARCB1-204ENST00000407422 GON4LQ3T8J9 2241 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 MED19A0JLT2 244 aaPredicted RBP20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 GBP1P32455 592 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 UBE2HP62256 183 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 COG7P83436 770 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 CETN1Q12798 172 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 PREPLQ4J6C6 727 aaPredicted RBP20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 EOGTQ5NDL2 527 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 XPO6Q96QU8 1125 aaKnown RBP20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 KIAA1468Q9P260 1216 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 KIAA1257Q9ULG3 409 aa20.22■□□□□ 0.83
SMARCB1-204ENST00000407422 PRRT4C9JH25 899 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 P4HA2O15460 535 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 GABBR2O75899 941 aa20.21■□□□□ 0.83
SMARCB1-204ENST00000407422 GNA14O95837 355 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms