RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ADAM23O75077 832 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 GADD45BO75293 160 aaPredicted RBP16.15■□□□□ 0.18
TPM1-207ENST00000403994 STC2O76061 302 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 RALAP11233 206 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 TBXAS1P24557 533 aaPredicted RBP16.15■□□□□ 0.18
TPM1-207ENST00000403994 PPP1R2P41236 205 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 TNFRSF4P43489 277 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 YWHAEP62258 255 aaKnown RBP16.15■□□□□ 0.18
TPM1-207ENST00000403994 MORC3Q14149 939 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 CCDC40Q4G0X9 1142 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 C10orf76Q5T2E6 689 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 EMC10Q5UCC4 262 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 ZNF276Q8N554 614 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 ANKRD52Q8NB46 1076 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 NELFBQ8WX92 580 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
TPM1-207ENST00000403994 RTKNQ9BST9 563 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 BBS2Q9BXC9 721 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 DNAJC17Q9NVM6 304 aaKnown RBP16.15■□□□□ 0.18
TPM1-207ENST00000403994 DEC1Q9P2X7 70 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 TSPAN16Q9UKR8 245 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 PCDHGA5Q9Y5G8 931 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 CEP295Q9C0D2 2601 aa16.15■□□□□ 0.18
TPM1-207ENST00000403994 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.14■□□□□ 0.17
TPM1-207ENST00000403994 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 TULP2O00295 520 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 BIN1O00499 593 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 TRIM24O15164 1050 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 GDF9O60383 454 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 FOXD2O60548 495 aaPredicted RBP16.14■□□□□ 0.17
TPM1-207ENST00000403994 TYRP14679 529 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 MPLP40238 635 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 TKTL1P51854 596 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 SLC8A3P57103 927 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 BST2Q10589 180 aaKnown RBP16.14■□□□□ 0.17
TPM1-207ENST00000403994 EFEMP1Q12805 493 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 LRMPQ12912 555 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 SF3A2Q15428 464 aaKnown RBP16.14■□□□□ 0.17
TPM1-207ENST00000403994 ELF2Q15723 593 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 PREPLQ4J6C6 727 aaPredicted RBP16.14■□□□□ 0.17
TPM1-207ENST00000403994 SGO2Q562F6 1265 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 PLA2G2CQ5R387 149 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 GRAMD4Q6IC98 578 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 TPGS1Q6ZTW0 290 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 ZNF513Q8N8E2 541 aaPredicted RBP16.14■□□□□ 0.17
TPM1-207ENST00000403994 UBXN6Q9BZV1 441 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 RASAL2Q9UJF2 1139 aa16.14■□□□□ 0.17
TPM1-207ENST00000403994 BICDL2A1A5D9 508 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 TBC1D3BA6NDS4 549 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 O00370 1275 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 SLC30A4O14863 429 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 XPO1O14980 1071 aaKnown RBP16.13■□□□□ 0.17
TPM1-207ENST00000403994 PMM2O15305 246 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 ZNF806P0C7X5 589 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 CD19P15391 556 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 BCKDHBP21953 392 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 PLA2G4AP47712 749 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 PDE4CQ08493 712 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 AASDHQ4L235 1098 aaPredicted RBP16.13■□□□□ 0.17
TPM1-207ENST00000403994 USP39Q53GS9 565 aaKnown RBP16.13■□□□□ 0.17
TPM1-207ENST00000403994 EOGTQ5NDL2 527 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 PMS2CLQ68D20 193 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 P2RY11Q96G91 374 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 ULBP1Q9BZM6 244 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 WDR35Q9P2L0 1181 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 HCN2Q9UL51 889 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
TPM1-207ENST00000403994 INVSQ9Y283 1065 aa16.13■□□□□ 0.17
TPM1-207ENST00000403994 EPG5Q9HCE0 2579 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 TCRBV21S2A2A0A5A6 115 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 RHOBTB1O94844 696 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 ZBED1O96006 694 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 KLKB1P03952 638 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 CORO1AP31146 461 aaKnown RBP16.12■□□□□ 0.17
TPM1-207ENST00000403994 GBP1P32455 592 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 YWHAGP61981 247 aaKnown RBP eCLIP16.12■□□□□ 0.17
TPM1-207ENST00000403994 ADIGQ0VDE8 80 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 PAK1Q13153 545 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 TMEM270Q6UE05 265 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 TOGARAM2Q6ZUX3 1019 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 RSRC2Q7L4I2 434 aaKnown RBP16.12■□□□□ 0.17
TPM1-207ENST00000403994 TRMT11Q7Z4G4 463 aaKnown RBP16.12■□□□□ 0.17
TPM1-207ENST00000403994 C11orf74Q86VG3 221 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 OLIG1Q8TAK6 271 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 HMGB4Q8WW32 186 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 KAT5Q92993 513 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 BHMTQ93088 406 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 NT5C1BQ96P26 610 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 XPO6Q96QU8 1125 aaKnown RBP16.12■□□□□ 0.17
TPM1-207ENST00000403994 POLMQ9NP87 494 aaPredicted RBP16.12■□□□□ 0.17
TPM1-207ENST00000403994 MARCH2Q9P0N8 246 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 HESX1Q9UBX0 185 aa16.12■□□□□ 0.17
TPM1-207ENST00000403994 ACACBO00763 2458 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 MUC22E2RYF6 1773 aaPredicted RBP16.11■□□□□ 0.17
TPM1-207ENST00000403994 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms