RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DHX35Q9H5Z1 703 aaKnown RBP26.69■■□□□ 1.86
CPNE1-205ENST00000401607 PIGVQ9NUD9 493 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ITGAVP06756 1048 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 NCAM1P13591 858 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 DEUP1Q05D60 604 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 PPP6R3Q5H9R7 873 aaPredicted RBP26.68■■□□□ 1.86
CPNE1-205ENST00000401607 ZNF365Q70YC5 407 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 TAS1R1Q7RTX1 841 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 NECAB2Q7Z6G3 386 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 PRUNE1Q86TP1 453 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 GLIS1Q8NBF1 620 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 PCDH19Q8TAB3 1148 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 SLC7A14Q8TBB6 771 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 KCTD15Q96SI1 283 aaPredicted RBP26.68■■□□□ 1.86
CPNE1-205ENST00000401607 PRDM5Q9NQX1 630 aaPredicted RBP26.68■■□□□ 1.86
CPNE1-205ENST00000401607 WHRNQ9P202 907 aa26.68■■□□□ 1.86
CPNE1-205ENST00000401607 SYNJ2BP-COX16A0A087WUM0 186 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 ABHD14A-ACY1A0A1B0GW23 586 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 KIAA0355O15063 1070 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 TBC1D4O60343 1298 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 EFEMP2O95967 443 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 KRT14P02533 472 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 NME3Q13232 169 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 SLC9A4Q6AI14 798 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 NPNTQ6UXI9 565 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 RSPO2Q6UXX9 243 aaPredicted RBP26.67■■□□□ 1.86
CPNE1-205ENST00000401607 TMC3Q7Z5M5 1100 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 SCN4BQ8IWT1 228 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 TOP1MTQ969P6 601 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 PGLYRP2Q96PD5 576 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 ACBD3Q9H3P7 528 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 COX16Q9P0S2 106 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 PCDHB5Q9Y5E4 795 aa26.67■■□□□ 1.86
CPNE1-205ENST00000401607 H3BQF6 201 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 CSF2RAP15509 400 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 BSPRYQ5W0U4 402 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 VSTM1Q6UX27 236 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 GSTA5Q7RTV2 222 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 CCDC89Q8N998 374 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 ADAM32Q8TC27 787 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 EDEM1Q92611 657 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 PGAP3Q96FM1 320 aaPredicted RBP26.66■■□□□ 1.86
CPNE1-205ENST00000401607 SNF8Q96H20 258 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 TMEM121Q9BTD3 319 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 WDR6Q9NNW5 1121 aaKnown RBP26.66■■□□□ 1.86
CPNE1-205ENST00000401607 PCDH10Q9P2E7 1040 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 AGPSO00116 658 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 GPR15P49685 360 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 VPS41P49754 854 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 PSTKQ8IV42 348 aaKnown RBP26.66■■□□□ 1.86
CPNE1-205ENST00000401607 PYROXD2Q8N2H3 581 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 PLD5Q8N7P1 536 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.66■■□□□ 1.86
CPNE1-205ENST00000401607 TXLNGYQ9BZA5 131 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 FAM129AQ9BZQ8 928 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 TMPRSS4Q9NRS4 437 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 RRN3Q9NYV6 651 aa26.66■■□□□ 1.86
CPNE1-205ENST00000401607 ATF2P15336 505 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 DEFB103AP81534 67 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 NOMO1Q15155 1222 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 TTC9BQ8N6N2 239 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 PIK3R5Q8WYR1 880 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 LRRC45Q96CN5 670 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 C8orf48Q96LL4 319 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 TTPALQ9BTX7 342 aa26.65■■□□□ 1.86
CPNE1-205ENST00000401607 APOL1O14791 398 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 ETS1P14921 441 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 ITIH2P19823 946 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 MAGEA11P43364 429 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 ALDH7A1P49419 539 aaKnown RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 CTCFP49711 727 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 EIF3EP60228 445 aaKnown RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 IFRD2Q12894 506 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 CALCOCO2Q13137 446 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 UAP1Q16222 522 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 RHBDF2Q6PJF5 856 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 TMCO2Q7Z6W1 182 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 ATAD1Q8NBU5 361 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 ZNF689Q96CS4 500 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 SLC9A7Q96T83 725 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 C10orf88Q9H8K7 445 aa26.64■■□□□ 1.86
CPNE1-205ENST00000401607 RC3H2Q9HBD1 1191 aaKnown RBP26.64■■□□□ 1.86
CPNE1-205ENST00000401607 GOLGA6BA6NDN3 693 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 ZSCAN5DPP0CG00 497 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 TGM2P21980 687 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 ADCY8P40145 1251 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 ARPP19P56211 112 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 DDR2Q16832 855 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 SDHAF4Q5VUM1 108 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 ANKS3Q6ZW76 656 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 BEND5Q7L4P6 421 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 RNF168Q8IYW5 571 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 IQCKQ8N0W5 287 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 P3H4Q92791 437 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 CSPG4P5Q96PW8 444 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 VN1R3Q9BXE9 311 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 CWC15Q9P013 229 aaKnown RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 H7C4K7 107 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 TRIM66O15016 1216 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 MCF2LO15068 1137 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms