RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 PTK6Q13882 451 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 RHOBTB2Q9BYZ6 727 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ZCCHC2Q9C0B9 1178 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 PAIP1Q9H074 479 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 TASP1Q9H6P5 420 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 ABI3Q9P2A4 366 aa11.31□□□□□ -0.6
CACNA1C-210ENST00000399606 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 C1QTNF3-AMACRE9PGA6 284 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 HLA-DQA2P01906 255 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 MPOP05164 745 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 APRTP07741 180 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 FGFR4P22455 802 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 HTR1BP28222 390 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ATAD3BQ5T9A4 648 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ZCCHC8Q6NZY4 707 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 C16orf89Q6UX73 402 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CAPNS2Q96L46 248 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 JSRP1Q96MG2 331 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 TUT1Q9H6E5 874 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 INTS10Q9NVR2 710 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 RGS5O15539 181 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CPSF4O95639 269 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 GGCXP38435 758 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 IL2P60568 153 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 HERVK_113P62684 666 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 PABPC1LQ4VXU2 614 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ADGRE3Q9BY15 652 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ARHGEF40Q8TER5 1519 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ADH1AP07327 375 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ALPPL2P10696 532 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 LIFRP42702 1097 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CLK2P49760 499 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 B3GALNT2Q8NCR0 500 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 TNIP2Q8NFZ5 429 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 S100A13Q99584 98 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 VAV3Q9UKW4 847 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 EVPLLA8MZ36 301 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CABYRO75952 493 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 PDE9AO76083 593 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 IFNAR1P17181 557 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 GEMIN4P57678 1058 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 OVOS1Q6IE37 1185 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 GAL3ST3Q96A11 431 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 TMA16Q96EY4 203 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 OLFM1Q99784 485 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 MXRA8Q9BRK3 442 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ETNK1Q9HBU6 452 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 MGAT4DA6NG13 374 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 EYA4O95677 639 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 PGK1P00558 417 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 IL1BP01584 269 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 TCN1P20061 433 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 GPD1P21695 349 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 P3H1Q32P28 736 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
CACNA1C-210ENST00000399606 MIF4GDA9UHW6 222 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GAS2O43903 313 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 LHX1P48742 406 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 PDK1Q15118 436 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 ESRP1Q6NXG1 681 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GRAMD1AQ96CP6 724 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 GRID2IPA4D2P6 1211 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 STRNO43815 780 aa11.29□□□□□ -0.6
CACNA1C-210ENST00000399606 IGSF6O95976 241 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms