RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KLK14Q9P0G3 267 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ARL2BPQ9Y2Y0 163 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RAD54BQ9Y620 910 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 IKBKGQ9Y6K9 419 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 H0YHG0 523 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GOLGA8MH3BSY2 632 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GPR182O15218 404 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SOX4Q06945 474 aaPredicted RBP18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SREBF2Q12772 1141 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PKN2Q16513 984 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 NPNTQ6UXI9 565 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 BNIPLQ7Z465 357 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PIGZQ86VD9 579 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ANKMY2Q8IV38 441 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FBF1Q8TES7 1133 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 LRRC4Q9HBW1 653 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 HEY1Q9Y5J3 304 aa18.39■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ANKRD65E5RJM6 399 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PTGESO14684 152 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TYROBPO43914 113 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 LCP1P13796 627 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SSTR1P30872 391 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 RAB27AP51159 221 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 BEX3Q00994 111 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 LRRC14Q15048 493 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MTFR1Q15390 333 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MSS51Q4VC12 460 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TRPM8Q7Z2W7 1104 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MRPL10Q7Z7H8 261 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FUKQ8N0W3 1084 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 VPS52Q8N1B4 723 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PAFAH2Q99487 392 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DHX35Q9H5Z1 703 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 XAB2Q9HCS7 855 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FAM105AQ9NUU6 356 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ETNK2Q9NVF9 386 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ZNF180Q9UJW8 692 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 STARD13Q9Y3M8 1113 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PTCH2Q9Y6C5 1203 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CAPN7Q9Y6W3 813 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TRPM7Q96QT4 1865 aa18.38■□□□□ 0.53
HLA-DQB1-204ENST00000399084 H3BRJ5 948 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ZNF623O75123 536 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 STK10O94804 968 aaKnown RBP18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 THP07101 528 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MLNP12872 115 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 RBL1P28749 1068 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FDFT1P37268 417 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PDK4Q16654 411 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PPP6R3Q5H9R7 873 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PDZD4Q76G19 769 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SPATA21Q7Z572 469 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MGARPQ8TDB4 240 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 QKIQ96PU8 341 aaKnown RBP eCLIP18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CSPG4P5Q96PW8 444 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SLC2A13Q96QE2 648 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 NPY6RQ99463 290 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 HAUS2Q9NVX0 235 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TMEM51Q9NW97 253 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MTMR10Q9NXD2 777 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FZD10Q9ULW2 581 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 C9IYK1 514 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DNAJC8O75937 253 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FAM200BP0CF97 657 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TAC1P20366 129 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CA4P22748 312 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ELK3P41970 407 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PSMC4P43686 418 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CA9Q16790 459 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GNASQ5JWF2 1037 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 RNF43Q68DV7 783 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CHADLQ6NUI6 762 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CCNJLQ8IV13 435 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SIX6OS1Q8N1H7 587 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ARRDC4Q8NCT1 418 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DCAKDQ8WVC6 231 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SLC44A1Q8WWI5 657 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PITPNM3Q9BZ71 974 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 C10orf88Q9H8K7 445 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CNGB3Q9NQW8 809 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FGFR1OP2Q9NVK5 253 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 KLHL14Q9P2G3 628 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CDH9Q9ULB4 789 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CDY2AQ9Y6F7 541 aa18.37■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TCRBV7S3A2A0A539 114 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ARHGEF37A1IGU5 675 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SLC10A3P09131 477 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 C6orf222P0C671 652 aaPredicted RBP18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PCSK1P29120 753 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 HCAR3P49019 387 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 WDR4P57081 412 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 RAB6CQ53S08 254 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 HHATQ5VTY9 493 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 HEATR6Q6AI08 1181 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SERINC5Q86VE9 423 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DEFB106AQ8N104 65 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms