RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SLC24A2Q9UI40 661 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 NUDT5Q9UKK9 219 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 IGKV6-21A0A0C4DH24 114 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 NDC80O14777 642 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 MOCS2O96007 188 aaPredicted RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ENO1P06733 434 aaKnown RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 SARNPP82979 210 aaKnown RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 TRNP1Q6NT89 227 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ADGRF2Q8IZF7 708 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 MPP5Q8N3R9 675 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 SERAC1Q96JX3 654 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ETNK2Q9NVF9 386 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 GRID1Q9ULK0 1009 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 EVPLQ92817 2033 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 CXorf49A8MYA2 514 aaPredicted RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 GYG2O15488 501 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ASMTLO95671 621 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 MYL2P10916 166 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 NCAM1P13591 858 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 SERPINB3P29508 390 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 PITX1P78337 314 aaPredicted RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 DEUP1Q05D60 604 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 SOWAHAQ2M3V2 549 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 WSCD1Q658N2 575 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 LCLAT1Q6UWP7 414 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 PIGZQ86VD9 579 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 CDKL3Q8IVW4 592 aaPredicted RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 NAT8LQ8N9F0 302 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 RAB3IPQ96QF0 476 aaPredicted RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ACSS3Q9H6R3 686 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 GGA2Q9UJY4 613 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 FAM237BA0A1B0GVD1 139 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 CFAP73A6NFT4 308 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 KRT38O76015 456 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 METTL18O95568 372 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 MMP3P08254 477 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 GHRP10912 638 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 TPH1P17752 444 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 MLH1P40692 756 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 NOMO1Q15155 1222 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 PLEKHH3Q7Z736 793 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 PPTC7Q8NI37 304 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 MICAL1Q8TDZ2 1067 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 GRAMD1AQ96CP6 724 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 MCRS1Q96EZ8 462 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 CELF6Q96J87 481 aaKnown RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 SRPK1Q96SB4 655 aaKnown RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 BCO2Q9BYV7 579 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 MYO18AQ92614 2054 aaKnown RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 KIAA1217Q5T5P2 1943 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 A0A1B0GUA9 196 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 ARHGAP42A6NI28 874 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 ZWINTO95229 277 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 ANP32DO95626 131 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 BAG2O95816 211 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 SNRPAP09012 282 aaKnown RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 GMPRP36959 345 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 TAF6P49848 677 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC20A2Q08357 652 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 CFAP157Q5JU67 520 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 TAPT1Q6NXT6 567 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 CMASQ8NFW8 434 aaPredicted RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 NSMCE1Q8WV22 266 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 NUDCD1Q96RS6 583 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 NCAPGQ9BPX3 1015 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 VTA1Q9NP79 307 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 LGALS13Q9UHV8 139 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 UBQLN1Q9UMX0 589 aaKnown RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 CEP350Q5VT06 3117 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 DNAJC8O75937 253 aaPredicted RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 SNAI1O95863 264 aaPredicted RBP10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 ABHD2P08910 425 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 MGAT1P26572 445 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 GCAP28676 217 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 RASSF2P50749 326 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 PDK4Q16654 411 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 RAPH1Q70E73 1250 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 TLK2Q86UE8 772 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 COLGALT1Q8NBJ5 622 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 STMN2Q93045 179 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 C16orf70Q9BSU1 422 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 CHKBQ9Y259 395 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 FIS1Q9Y3D6 152 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 SNX10Q9Y5X0 201 aa10.81□□□□□ -0.68
CPSF1P1-201ENST00000397477 LTBP3Q9NS15 1303 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 SMIM28A0A1B0GU29 152 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 XPOTO43592 962 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 KCNA4P22459 653 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 PROZP22891 400 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 ARPP19P56211 112 aa10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 RPL10AP62906 217 aaKnown RBP10.8□□□□□ -0.68
CPSF1P1-201ENST00000397477 MGAT5Q09328 741 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms