RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TBCBQ99426 244 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 PRKD2Q9BZL6 878 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 FAM204AQ9H8W3 233 aa24.59■■□□□ 1.53
TSPAN4-202ENST00000397396 ZNF840PA6NDX5 716 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 M0QYT0 321 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 CCL16O15467 120 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 NCK2O43639 380 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 KRT7P08729 469 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 POU3F3P20264 500 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 KPNA1P52294 538 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 DEUP1Q05D60 604 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 NNTQ13423 1086 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 KCNC3Q14003 757 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 C15orf59Q2T9L4 293 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 HECTD3Q5T447 861 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 SYPL2Q5VXT5 272 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 TMEM184AQ6ZMB5 413 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 BNIPLQ7Z465 357 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 DQX1Q8TE96 717 aaKnown RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 MRPS31Q92665 395 aaKnown RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 HES6Q96HZ4 224 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 GOLPH3Q9H4A6 298 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 PRDM12Q9H4Q4 367 aa24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 RANBP2P49792 3224 aaKnown RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 ZNF638Q14966 1978 aaKnown RBP24.58■■□□□ 1.52
TSPAN4-202ENST00000397396 PRPSAP2O60256 369 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 TLR5O60602 858 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 TRUB2O95900 331 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 EPHA5P54756 1037 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 AIF1P55008 147 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 MTA1Q13330 715 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 TCEAL5Q5H9L2 206 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 TMC8Q8IU68 726 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 CD101Q93033 1021 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 TTYH1Q9H313 450 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 DDIT4Q9NX09 232 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 DDX56Q9NY93 547 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 ZMYM5Q9UJ78 669 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 HYOU1Q9Y4L1 999 aa24.57■■□□□ 1.52
TSPAN4-202ENST00000397396 RFPL2O75678 378 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 F11P03951 625 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 TCP1P17987 556 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 C10orf120Q5SQS8 335 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 PDZD4Q76G19 769 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 ZNF592Q92610 1267 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 CORO1BQ9BR76 489 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 TLR10Q9BXR5 811 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 NACA2Q9H009 215 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 ZNF334Q9HCZ1 680 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 OSER1Q9NX31 292 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 USP18Q9UMW8 372 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 PCDHA3Q9Y5H8 950 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 CLUHO75153 1309 aa24.56■■□□□ 1.52
TSPAN4-202ENST00000397396 CCDC195A0A1B0GUA6 201 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 SOBPA7XYQ1 873 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 ENC1O14682 589 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 ZNF197O14709 1029 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 IRAK2O43187 625 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 IGLV3-25P01717 112 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 ATP1A1P05023 1023 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 SLC2A3P11169 496 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 PRLRP16471 622 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 DDX6P26196 483 aaKnown RBP eCLIP24.55■■□□□ 1.527e-7■■■■□ 24.1
TSPAN4-202ENST00000397396 GABRR2P28476 465 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 MIPP30301 263 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 ATP5C1P36542 298 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 HDAC4P56524 1084 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 RWDD2BP57060 319 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 HYAL1Q12794 435 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 TUBB2AQ13885 445 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 ARL13BQ3SXY8 428 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 BOLA3Q53S33 107 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 ODF2Q5BJF6 829 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 PAPD7Q5XG87 772 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 TAC4Q86UU9 113 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 PSTKQ8IV42 348 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 TEKT4Q8WW24 435 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 GAS2L1Q99501 681 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 TUBB2BQ9BVA1 445 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 LRRC3Q9BY71 257 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 PIDD1Q9HB75 910 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 IL21Q9HBE4 155 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 DNMT3LQ9UJW3 386 aa24.55■■□□□ 1.52
TSPAN4-202ENST00000397396 TADA3O75528 432 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 HOXB8P17481 243 aaPredicted RBP24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 SLC25A11Q02978 314 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 NME3Q13232 169 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 ARHGAP15Q53QZ3 475 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 BRMS1LQ5PSV4 323 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 IGFLR1Q9H665 355 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.54■■□□□ 1.525e-7■■■■■ 27.2
TSPAN4-202ENST00000397396 SNX12Q9UMY4 172 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 TLR6Q9Y2C9 796 aa24.54■■□□□ 1.52
TSPAN4-202ENST00000397396 CES2O00748 559 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 MDM4O15151 490 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 RHOP08100 348 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 MYL4P12829 197 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 CETN2P41208 172 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 GRIN2CQ14957 1233 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 OTUD1Q5VV17 481 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms