RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 C2CD6Q53TS8 623 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 DEPDC1BQ8WUY9 529 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 EDEM1Q92611 657 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 FGF14Q92915 247 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 KHSRPQ92945 711 aaKnown RBP eCLIP17.17■□□□□ 0.34
AP1S3-202ENST00000396653 ZFRQ96KR1 1074 aaKnown RBP17.17■□□□□ 0.34
AP1S3-202ENST00000396653 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 SMOC2Q9H3U7 446 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 RRN3Q9NYV6 651 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 TMEM59LQ9UK28 342 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 CPQQ9Y646 472 aa17.17■□□□□ 0.34
AP1S3-202ENST00000396653 GOLGA8SH3BPF8 625 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 DPYSL4O14531 572 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 NOS2P35228 1153 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 CYLC1P35663 651 aaPredicted RBP17.16■□□□□ 0.34
AP1S3-202ENST00000396653 MATKP42679 507 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 COG7P83436 770 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 GFPT1Q06210 699 aaPredicted RBP17.16■□□□□ 0.34
AP1S3-202ENST00000396653 TAF5Q15542 800 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 ZNF77Q15935 545 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 TANGO2Q6ICL3 276 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 PLEKHA7Q6IQ23 1121 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 DNAJC24Q6P3W2 148 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 PARM1Q6UWI2 310 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 DEFB106AQ8N104 65 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 DQX1Q8TE96 717 aaKnown RBP17.16■□□□□ 0.34
AP1S3-202ENST00000396653 SERPINB11Q96P15 392 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 SELENOOQ9BVL4 669 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 KLF16Q9BXK1 252 aaPredicted RBP17.16■□□□□ 0.34
AP1S3-202ENST00000396653 METTL5Q9NRN9 209 aaKnown RBP17.16■□□□□ 0.34
AP1S3-202ENST00000396653 TMEM51Q9NW97 253 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 RASAL2Q9UJF2 1139 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 NUDT5Q9UKK9 219 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 HBS1LQ9Y450 684 aaKnown RBP17.16■□□□□ 0.34
AP1S3-202ENST00000396653 NUMBLQ9Y6R0 609 aa17.16■□□□□ 0.34
AP1S3-202ENST00000396653 ANKRD62A6NC57 917 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 SIGLEC16A6NMB1 481 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 LCA5LO95447 670 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 TBX18O95935 607 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 IGLV3-25P01717 112 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 RRM1P23921 792 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 KPNA1P52294 538 aaPredicted RBP17.15■□□□□ 0.34
AP1S3-202ENST00000396653 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 EFEMP1Q12805 493 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 C10orf76Q5T2E6 689 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 VITQ6UXI7 678 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 TMEM139Q8IV31 216 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 BPIFB1Q8TDL5 484 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 SH3RF2Q8TEC5 729 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 ZNF653Q96CK0 615 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 BAG1Q99933 345 aaPredicted RBP17.15■□□□□ 0.34
AP1S3-202ENST00000396653 SMG9Q9H0W8 520 aaKnown RBP17.15■□□□□ 0.34
AP1S3-202ENST00000396653 KCNK12Q9HB15 430 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 PARVAQ9NVD7 372 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.15■□□□□ 0.34
AP1S3-202ENST00000396653 CNOT8Q9UFF9 292 aaKnown RBP17.15■□□□□ 0.34
AP1S3-202ENST00000396653 LIMD1Q9UGP4 676 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 STAP1Q9ULZ2 295 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 NAALADL1Q9UQQ1 740 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 CCL26Q9Y258 94 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 SCINQ9Y6U3 715 aa17.15■□□□□ 0.34
AP1S3-202ENST00000396653 COL4A2P08572 1712 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 FAM170AA1A519 330 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 LEFTY2O00292 366 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 MDM4O15151 490 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 GRAP2O75791 330 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 KRT3P12035 628 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 FLT3P36888 993 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 VIPR2P41587 438 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 ZXDBP98169 803 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 TRIP4Q15650 581 aaPredicted RBP17.14■□□□□ 0.33
AP1S3-202ENST00000396653 DCAF6Q58WW2 860 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 PPP1R15BQ5SWA1 713 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 SYPL2Q5VXT5 272 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 GJD3Q8N144 294 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 ADAMTS19Q8TE59 1207 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 PLD4Q96BZ4 506 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 RSPRY1Q96DX4 576 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 PDLIM2Q96JY6 352 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 KXD1Q9BQD3 176 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 DDX23Q9BUQ8 820 aaKnown RBP17.14■□□□□ 0.33
AP1S3-202ENST00000396653 SPTLC3Q9NUV7 552 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 SMPD4Q9NXE4 827 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 INTUQ9ULD6 942 aa17.14■□□□□ 0.33
AP1S3-202ENST00000396653 C5orf42Q9H799 3197 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 SLC12A8A0AV02 714 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 EIF3CLB5ME19 914 aaKnown RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 IRAK2O43187 625 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 TRUB2O95900 331 aaKnown RBP17.13■□□□□ 0.33
AP1S3-202ENST00000396653 IGLV3-27P01718 113 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 H2AFZP0C0S5 128 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 PSMC3P17980 439 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 GALCP54803 685 aa17.13■□□□□ 0.33
AP1S3-202ENST00000396653 RING1Q06587 406 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms