RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 TRIM9Q9C026 710 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 DPEP3Q9H4B8 488 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 PCIF1Q9H4Z3 704 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 PCDHB13Q9Y5F0 798 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 CABIN1Q9Y6J0 2220 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 CYSRT1A8MQ03 144 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 KIAA0391O15091 583 aaKnown RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 NPC1O15118 1278 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 GCNT3O95395 438 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 HLA-EP13747 358 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 EIF2S3P41091 472 aaKnown RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 DGKGP49619 791 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 CASP5P51878 434 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 ALCAMQ13740 583 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 STARD3Q14849 445 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 ZNF605Q86T29 641 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 TMPRSS12Q86WS5 348 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 OR6B3Q8NGW1 331 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 KCNK16Q96T55 309 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 NUP58Q9BVL2 599 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 MKRN2Q9H000 416 aaKnown RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 PCED1AQ9H1Q7 454 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 OLFML3Q9NRN5 406 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 TBC1D7Q9P0N9 293 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 GMIPQ9P107 970 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 THAP10Q9P2Z0 257 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 EIF2B4Q9UI10 523 aaKnown RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 KALRNO60229 2985 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 TENM4Q6N022 2769 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 PAPSS1O43252 624 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 TLX3O43711 291 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 PCDHGA12O60330 932 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 CST3P01034 146 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 ACO1P21399 889 aaKnown RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 GRK6P43250 576 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 KIF19Q2TAC6 998 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 PAQR9Q6ZVX9 377 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 TRAPPC11Q7Z392 1133 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 WDR49Q8IV35 697 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 SYCP3Q8IZU3 236 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 B3GALNT2Q8NCR0 500 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 SIPA1Q96FS4 1042 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 OSGEPQ9NPF4 335 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■■■■ 28.8
SCFD1-202ENST00000396629 SLC27A6Q9Y2P4 619 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 SNX11Q9Y5W9 270 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 ATP8B3O60423 1300 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 ZNF233A6NK53 670 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 PLK4O00444 970 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 PRPF6O94906 941 aaKnown RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 IL12RB1P42701 662 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 CSNK1EP49674 416 aaKnown RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 PGFP49763 221 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 AFF3P51826 1226 aaKnown RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 COPAP53621 1224 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 SLC5A3P53794 718 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 DHRS13Q6UX07 377 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 LRRC69Q6ZNQ3 347 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 TMPRSS6Q8IU80 811 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 ENGASEQ8NFI3 743 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 RASSF8Q8NHQ8 419 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 NOC3LQ8WTT2 800 aaKnown RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 NXPE2Q96DL1 559 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 FGFBP2Q9BYJ0 223 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 STK17AQ9UEE5 414 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 LSM7Q9UK45 103 aaKnown RBP8.92□□□□□ -0.98
SCFD1-202ENST00000396629 ANKRD6Q9Y2G4 727 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 KIF3AQ9Y496 699 aa8.92□□□□□ -0.98
SCFD1-202ENST00000396629 KNTC1P50748 2209 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 FRMD3A2A2Y4 597 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 A8MXQ7 604 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 TLR5O60602 858 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
SCFD1-202ENST00000396629 BMP15O95972 392 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 C7P10643 843 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 Q6ZNB5 142 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 FAM35AQ86V20 835 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 CBWD2Q8IUF1 395 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 PRCCQ92733 491 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-202ENST00000396629 IGSF8Q969P0 613 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 P2RY11Q96G91 374 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 NACA2Q9H009 215 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 DMAP1Q9NPF5 467 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-202ENST00000396629 PCDHGA1Q9Y5H4 931 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 SLCO1B1Q9Y6L6 691 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 NUMA1Q14980 2115 aa8.91□□□□□ -0.98
SCFD1-202ENST00000396629 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 PTPRQQ9UMZ3 2332 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 TEX51A0A1B0GUA7 166 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 J3QKU1 62 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 CAPN9O14815 690 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 EIF5BO60841 1220 aaKnown RBP8.9□□□□□ -0.98
SCFD1-202ENST00000396629 TBX18O95935 607 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 GRIA4P48058 902 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 CCT8P50990 548 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 ORC1Q13415 861 aa8.9□□□□□ -0.98
SCFD1-202ENST00000396629 RTP5Q14D33 572 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms