RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 KAT5Q92993 513 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 ZC3H10Q96K80 434 aaKnown RBP19.24■□□□□ 0.67
FXN-203ENST00000396366 CEP63Q96MT8 703 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 UBXN6Q9BZV1 441 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 METTL14Q9HCE5 456 aaKnown RBP19.24■□□□□ 0.67
FXN-203ENST00000396366 DEC1Q9P2X7 70 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 TSPAN16Q9UKR8 245 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 ABCA7Q8IZY2 2146 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 DCDC2BA2VCK2 349 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 RNF225M0QZC1 329 aaPredicted RBP19.23■□□□□ 0.67
FXN-203ENST00000396366 STC2O76061 302 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 EPN2O95208 641 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 RALAP11233 206 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 CD19P15391 556 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 PSEN1P49768 467 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 Q6ZNB5 142 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 ZNF276Q8N554 614 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 TFAP2BQ92481 460 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 BHMTQ93088 406 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 BBS2Q9BXC9 721 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 RXFP3Q9NSD7 469 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 CLIC5Q9NZA1 410 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 RASAL2Q9UJF2 1139 aa19.23■□□□□ 0.67
FXN-203ENST00000396366 LSM7Q9UK45 103 aaKnown RBP19.23■□□□□ 0.67
FXN-203ENST00000396366 CDV3Q9UKY7 258 aaKnown RBP19.23■□□□□ 0.67
FXN-203ENST00000396366 TYRP14679 529 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 BCKDHBP21953 392 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 GOLGA8FQ08AF8 430 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 GOLGA8DPQ0D2H9 430 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 SGO2Q562F6 1265 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 C10orf76Q5T2E6 689 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 TOGARAM2Q6ZUX3 1019 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 BHLHA9Q7RTU4 235 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 FRMD1Q8N878 549 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 LMO3Q8TAP4 145 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 ERLEC1Q96DZ1 483 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 LOXL4Q96JB6 756 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 ZSWIM1Q9BR11 485 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 ULBP1Q9BZM6 244 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 FAM124BQ9H5Z6 455 aaPredicted RBP19.22■□□□□ 0.67
FXN-203ENST00000396366 DNAJC17Q9NVM6 304 aaKnown RBP19.22■□□□□ 0.67
FXN-203ENST00000396366 PLK2Q9NYY3 685 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 LAMA1P25391 3075 aa19.22■□□□□ 0.67
FXN-203ENST00000396366 ZBED1O96006 694 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 GBP1P32455 592 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 WASP42768 502 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 YWHAGP61981 247 aaKnown RBP eCLIP19.21■□□□□ 0.673e-6■■■■□ 22
FXN-203ENST00000396366 GRAMD4Q6IC98 578 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 TMEM270Q6UE05 265 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 RRAGAQ7L523 313 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 TERB1Q8NA31 727 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 RLN3Q8WXF3 142 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 CNOT6LQ96LI5 555 aaKnown RBP19.21■□□□□ 0.67
FXN-203ENST00000396366 ACOX2Q99424 681 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 MARK1Q9P0L2 795 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 PCDHB4Q9Y5E5 795 aa19.21■□□□□ 0.67
FXN-203ENST00000396366 PRRT4C9JH25 899 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 O00370 1275 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 XPO1O14980 1071 aaKnown RBP19.2■□□□□ 0.66
FXN-203ENST00000396366 CACNG3O60359 315 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 GABBR2O75899 941 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 CISD3P0C7P0 127 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 ZNF806P0C7X5 589 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 VDRP11473 427 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 PPP1R2P41236 205 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 SLC8A3P57103 927 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 YWHAEP62258 255 aaKnown RBP19.2■□□□□ 0.66
FXN-203ENST00000396366 CAMK4Q16566 473 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 USP39Q53GS9 565 aaKnown RBP19.2■□□□□ 0.66
FXN-203ENST00000396366 EOGTQ5NDL2 527 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 PLA2G2CQ5R387 149 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 PM20D1Q6GTS8 502 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 TADA2BQ86TJ2 420 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 ARHGEF19Q8IW93 802 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 ZNF513Q8N8E2 541 aaPredicted RBP19.2■□□□□ 0.66
FXN-203ENST00000396366 NT5C1BQ96P26 610 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 SRRTQ9BXP5 876 aaKnown RBP19.2■□□□□ 0.66
FXN-203ENST00000396366 MARCH2Q9P0N8 246 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 WDR35Q9P2L0 1181 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 SPTBN2O15020 2390 aa19.2■□□□□ 0.66
FXN-203ENST00000396366 NCOR2Q9Y618 2525 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 THADAQ6YHU6 1953 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 SLC12A8A0AV02 714 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 PIK3R2O00459 728 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 PMM2O15305 246 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 SDHBP21912 280 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 TBXAS1P24557 533 aaPredicted RBP19.19■□□□□ 0.66
FXN-203ENST00000396366 MPLP40238 635 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 BCAT1P54687 386 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 ADIGQ0VDE8 80 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 BST2Q10589 180 aaKnown RBP19.19■□□□□ 0.66
FXN-203ENST00000396366 KCNH2Q12809 1159 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 PKDCCQ504Y2 493 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 EGFLAMQ63HQ2 1017 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 TCEAL6Q6IPX3 200 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 RSRC2Q7L4I2 434 aaKnown RBP19.19■□□□□ 0.66
FXN-203ENST00000396366 DENND1CQ8IV53 801 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 TRIM59Q8IWR1 403 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 ARHGAP18Q8N392 663 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 PPM1KQ8N3J5 372 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms