RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PDE4CQ08493 712 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 BST2Q10589 180 aaKnown RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 HADHQ16836 314 aaKnown RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 SLC39A12Q504Y0 691 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 CYP4V2Q6ZWL3 525 aaPredicted RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 EMC1Q8N766 993 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 MRPL43Q8N983 215 aaKnown RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 ATG4AQ8WYN0 398 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 RAPGEF5Q92565 580 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 LPIN3Q9BQK8 851 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 CLSTN3Q9BQT9 956 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 OXCT2Q9BYC2 517 aaPredicted RBP15.78■□□□□ 0.12
SCAF11-204ENST00000395454 FAM49BQ9NUQ9 324 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 ASNSD1Q9NWL6 643 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 BACE2Q9Y5Z0 518 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 NFS1Q9Y697 457 aa15.78■□□□□ 0.12
SCAF11-204ENST00000395454 COL4A4P53420 1690 aaPredicted RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 MYBPHLA2RUH7 354 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 GOLGA8KD6RF30 607 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 TULP2O00295 520 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 TEX28O15482 410 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 ADAM12O43184 909 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 TBC1D4O60343 1298 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 LILRB3O75022 631 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 ENDOD1O94919 500 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 GAS8O95995 478 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 CNPP09543 421 aaKnown RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 PTPN1P18031 435 aaKnown RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 GPD1P21695 349 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 CREMQ03060 361 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 ADCY2Q08462 1091 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 MDH1BQ5I0G3 518 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 ZNF697Q5TEC3 545 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 SLC8B1Q6J4K2 584 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 LRRTM3Q86VH5 581 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 FBXO25Q8TCJ0 367 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 NKD2Q969F2 451 aaPredicted RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 RNF25Q96BH1 459 aaPredicted RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 PIWIL1Q96J94 861 aaKnown RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 FAM161BQ96MY7 647 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 PGLYRP2Q96PD5 576 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 FRMD8P1Q9BZ68 369 aaPredicted RBP15.77■□□□□ 0.12
SCAF11-204ENST00000395454 ZCWPW1Q9H0M4 648 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 CRTAC1Q9NQ79 661 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 SNX24Q9Y343 169 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 IRAK3Q9Y616 596 aa15.77■□□□□ 0.12
SCAF11-204ENST00000395454 C2orf71A6NGG8 1288 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 POLR3GO15318 223 aaPredicted RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 PAPSS1O43252 624 aaPredicted RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 MIPP30301 263 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 SSR1P43307 286 aaKnown RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 SLC6A3Q01959 620 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 ROR1Q01973 937 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 RHBDF2Q6PJF5 856 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 SLC26A9Q7LBE3 791 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 VSIG1Q86XK7 387 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 GPR65Q8IYL9 337 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 DCP1BQ8IZD4 617 aaKnown RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 EXOC4Q96A65 974 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 HSFY1Q96LI6 401 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 NCAPGQ9BPX3 1015 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 HEMGNQ9BXL5 484 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 EMILIN2Q9BXX0 1053 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 TRIM31Q9BZY9 425 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 PRDM12Q9H4Q4 367 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 PSD3Q9NYI0 1048 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 WDR27A2RRH5 827 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 LIASO43766 372 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 RNF8O76064 485 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 TRUB2O95900 331 aaKnown RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 NDUFV1P49821 464 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 LMNB2Q03252 620 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 GRIN2CQ14957 1233 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 MAPRE1Q15691 268 aaKnown RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 PDE12Q6L8Q7 609 aaKnown RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 BBS12Q6ZW61 710 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 MYCBPAPQ8TBZ2 947 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 PCED1BQ96HM7 432 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 LMAN2LQ9H0V9 348 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 RXFP1Q9HBX9 757 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 TMLHEQ9NVH6 421 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 KLHL11Q9NVR0 708 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 ADAM21Q9UKJ8 722 aa15.76■□□□□ 0.11
SCAF11-204ENST00000395454 DRG1Q9Y295 367 aaKnown RBP15.76■□□□□ 0.11
SCAF11-204ENST00000395454 LRRD1A4D1F6 860 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 PI4K2BG5E9Z4 385 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 ADH1AP07327 375 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 CCDC130P13994 396 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 ITIH2P19823 946 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 KDELR1P24390 212 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 KLRC2P26717 231 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 GJC1P36383 396 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 PTPN9P43378 593 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 ACADSBP45954 432 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 ARSEP51690 589 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 PLTPP55058 493 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 DHX9Q08211 1270 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms