RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 CCDC137Q6PK04 289 aaKnown RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 DENND5BQ6ZUT9 1274 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 SCD5Q86SK9 330 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 FAM131BQ86XD5 332 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 VSIG1Q86XK7 387 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 VPS52Q8N1B4 723 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 SLC7A14Q8TBB6 771 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 RAD9AQ99638 391 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 DCLK3Q9C098 648 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 WDR6Q9NNW5 1121 aaKnown RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 PIGVQ9NUD9 493 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 AFF4Q9UHB7 1163 aaKnown RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 PLXNA4Q9HCM2 1894 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 TTI1O43156 1089 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 ABLIM3O94929 683 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 URODP06132 367 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 IL4RP24394 825 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 MCM3P25205 808 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 PGFP49763 221 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 CLCN6P51797 869 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 DEUP1Q05D60 604 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 CCNG2Q16589 344 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 GPR65Q8IYL9 337 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 RUNDC3BQ96NL0 473 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 HINFPQ9BQA5 517 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 CALN1Q9BXU9 219 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 PLEKHA4Q9H4M7 779 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 PCDH18Q9HCL0 1135 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 GDF3Q9NR23 364 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 HOMER3Q9NSC5 361 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 ABCC13Q9NSE7 274 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 ARGLU1Q9NWB6 273 aaPredicted RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 STK39Q9UEW8 545 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 ZSCAN5CA6NGD5 496 aaPredicted RBP21.14■□□□□ 0.97
HDDC3-202ENST00000394272 FGF18O76093 207 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 PTGIRP43119 386 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 DR1Q01658 176 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 NME3Q13232 169 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 BBS12Q6ZW61 710 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 MON1AQ86VX9 555 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 PSTKQ8IV42 348 aaKnown RBP21.14■□□□□ 0.97
HDDC3-202ENST00000394272 MAP7D3Q8IWC1 876 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 ZNF461Q8TAF7 563 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 ADAM32Q8TC27 787 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 GPR152Q8TDT2 470 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 ATG4AQ8WYN0 398 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 NMUR1Q9HB89 426 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 MTMR10Q9NXD2 777 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 HSFX1Q9UBD0 423 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 FZD10Q9ULW2 581 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 AP4E1Q9UPM8 1137 aa21.14■□□□□ 0.97
HDDC3-202ENST00000394272 ZNF487B1APH4 448 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 RTN3O95197 1032 aaPredicted RBP21.13■□□□□ 0.97
HDDC3-202ENST00000394272 IGLV3-25P01717 112 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 ATP2A2P16615 1042 aaKnown RBP21.13■□□□□ 0.97
HDDC3-202ENST00000394272 ATF6P18850 670 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 L1CAMP32004 1257 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 RPL10AP62906 217 aaKnown RBP21.13■□□□□ 0.97
HDDC3-202ENST00000394272 MMRN1Q13201 1228 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 KRT81Q14533 505 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 RASIP1Q5U651 963 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 TPGS2Q68CL5 300 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 DQX1Q8TE96 717 aaKnown RBP21.13■□□□□ 0.97
HDDC3-202ENST00000394272 SLCO2A1Q92959 643 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 CEP295NLQ96MC4 621 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 COMMD8Q9NX08 183 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 SYNJ2BP-COX16A0A087WUM0 186 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 CST8O60676 142 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 LILRB3O75022 631 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 TNFRSF8P28908 595 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 KCNJ1P48048 391 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 GUCY2DQ02846 1103 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 KRT17Q04695 432 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 EIF4EBP2Q13542 120 aaPredicted RBP21.13■□□□□ 0.97
HDDC3-202ENST00000394272 BTBD8Q5XKL5 378 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 TAC4Q86UU9 113 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 NTAN1Q96AB6 310 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 FAF2Q96CS3 445 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 ZNF670Q9BS34 389 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 ZBP1Q9H171 429 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 EPB41L5Q9HCM4 733 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 DDIT4Q9NX09 232 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 COX16Q9P0S2 106 aa21.13■□□□□ 0.97
HDDC3-202ENST00000394272 A0A1W2PQH9 124 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 LCHNA4D1U4 455 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 FAM187AA6NFU0 413 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 TLL1O43897 1013 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 F9P00740 461 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 ATF2P15336 505 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 YWHAQP27348 245 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 TUFMP49411 452 aaKnown RBP21.12■□□□□ 0.97
HDDC3-202ENST00000394272 AIF1P55008 147 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 RAB33AQ14088 237 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 DRICH1Q6PGQ1 229 aaPredicted RBP21.12■□□□□ 0.97
HDDC3-202ENST00000394272 CCNI2Q6ZMN8 369 aaPredicted RBP21.12■□□□□ 0.97
HDDC3-202ENST00000394272 JAMLQ86YT9 394 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 HNRNPLLQ8WVV9 542 aaKnown RBP21.12■□□□□ 0.97
HDDC3-202ENST00000394272 AUTS2Q8WXX7 1259 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 SEC14L1Q92503 715 aa21.12■□□□□ 0.97
HDDC3-202ENST00000394272 RNF157Q96PX1 679 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms