RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TRPM4Q8TD43 1214 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 FGD4Q96M96 766 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 SNRNP25Q9BV90 132 aaKnown RBP19.54■□□□□ 0.72
CBX1-202ENST00000393408 NGRNQ9NPE2 291 aaKnown RBP19.54■□□□□ 0.72
CBX1-202ENST00000393408 ZSWIM8A7E2V4 1837 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 CSDE1O75534 798 aaKnown RBP19.54■□□□□ 0.72
CBX1-202ENST00000393408 MRPS35P82673 323 aaKnown RBP19.54■□□□□ 0.72
CBX1-202ENST00000393408 SLC34A1Q06495 639 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 CHI3L2Q15782 390 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 AMHR2Q16671 573 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 FAM187BQ17R55 369 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 ZNF534Q76KX8 674 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 TREML1Q86YW5 311 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 FAM172AQ8WUF8 416 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 MTBPQ96DY7 904 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 SLC13A1Q9BZW2 595 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 PDZD7Q9H5P4 517 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 KIAA1257Q9ULG3 409 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 HBP1O60381 514 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 KRT38O76015 456 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 PDHA1P08559 390 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 PGM1P36871 562 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 RGS7P49802 495 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 SLC26A2P50443 739 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 ARID3BQ8IVW6 561 aaPredicted RBP19.53■□□□□ 0.72
CBX1-202ENST00000393408 LRRN4Q8WUT4 740 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 SIGLEC10Q96LC7 697 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 TBCBQ99426 244 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 SMARCAD1Q9H4L7 1026 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 ZNF395Q9H8N7 513 aaPredicted RBP19.53■□□□□ 0.72
CBX1-202ENST00000393408 GGA3Q9NZ52 723 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 CCDC195A0A1B0GUA6 201 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 HMX2A2RU54 273 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 FAM159BA6NKW6 160 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 CYB561D2O14569 222 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 CAPN9O14815 690 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 TBX10O75333 385 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 RAP1GDS1P52306 607 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 CDK18Q07002 472 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 TMEM132DQ14C87 1099 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 GOLGA7BQ2TAP0 167 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 TRMT10BQ6PF06 316 aaKnown RBP19.53■□□□□ 0.72
CBX1-202ENST00000393408 NUDCD3Q8IVD9 361 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 C12orf29Q8N999 325 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 RAB3IL1Q8TBN0 382 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 KHSRPQ92945 711 aaKnown RBP eCLIP19.53■□□□□ 0.72
CBX1-202ENST00000393408 FAM136AQ96C01 138 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 ACAP3Q96P50 834 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 TRIM56Q9BRZ2 755 aaKnown RBP19.53■□□□□ 0.72
CBX1-202ENST00000393408 ZNF670Q9BS34 389 aa19.53■□□□□ 0.72
CBX1-202ENST00000393408 STX18Q9P2W9 335 aaKnown RBP19.53■□□□□ 0.72
CBX1-202ENST00000393408 MAGEC1O60732 1142 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
CBX1-202ENST00000393408 C22orf31O95567 290 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 METTL18O95568 372 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 PHKA2P46019 1235 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 CPA2P48052 419 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 PSEN1P49768 467 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 C4orf22Q6V702 233 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 LRRC74BQ6ZQY2 392 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 CDKL3Q8IVW4 592 aaPredicted RBP19.52■□□□□ 0.72
CBX1-202ENST00000393408 ARHGAP24Q8N264 748 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 GSDMBQ8TAX9 411 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 COPS5Q92905 334 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 EBNA1BP2Q99848 306 aaKnown RBP19.52■□□□□ 0.72
CBX1-202ENST00000393408 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 WWP1Q9H0M0 922 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 PCMTD2Q9NV79 361 aa19.52■□□□□ 0.72
CBX1-202ENST00000393408 DPPA5A6NC42 116 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 A8MXQ7 604 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 B2RBV5 119 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 MDM4O15151 490 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 SNNO75324 88 aaPredicted RBP19.52■□□□□ 0.71
CBX1-202ENST00000393408 PGK2P07205 417 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 CRHR1P34998 444 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 KLC1Q07866 573 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 GRIK3Q13003 919 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 VGLL4Q14135 290 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 PMF1Q6P1K2 205 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 TMPRSS6Q8IU80 811 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 MPP5Q8N3R9 675 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 PDCD7Q8N8D1 485 aaKnown RBP19.52■□□□□ 0.71
CBX1-202ENST00000393408 STMN2Q93045 179 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 CPB2Q96IY4 423 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 FAM124BQ9H5Z6 455 aaPredicted RBP19.52■□□□□ 0.71
CBX1-202ENST00000393408 NRDE2Q9H7Z3 1164 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 PPARGC1AQ9UBK2 798 aaKnown RBP19.52■□□□□ 0.71
CBX1-202ENST00000393408 ITGA11Q9UKX5 1188 aa19.52■□□□□ 0.71
CBX1-202ENST00000393408 MCM3APO60318 1980 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 STAU1O95793 577 aaKnown RBP19.51■□□□□ 0.71
CBX1-202ENST00000393408 ENO1P06733 434 aaKnown RBP19.51■□□□□ 0.71
CBX1-202ENST00000393408 TPSB2P20231 275 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 SDC4P31431 198 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 TPSAB1Q15661 275 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 NDUFAF2Q8N183 169 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 TTC39CQ8N584 583 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 FBXO27Q8NI29 283 aa19.51■□□□□ 0.71
CBX1-202ENST00000393408 SLC16A10Q8TF71 515 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms