RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PGLYRP2Q96PD5 576 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 RNF157Q96PX1 679 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 TRIM62Q9BVG3 475 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 NEUROG2Q9H2A3 272 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 FAM153AQ9UHL3 310 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 FZD10Q9ULW2 581 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 SNX24Q9Y343 169 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 APOC4-APOC2K7ER74 178 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 APOC2P02655 101 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 ACRP10323 421 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 CPB1P15086 417 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 L1CAMP32004 1257 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 GBP1P32455 592 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 VCPP55072 806 aaKnown RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 TFDP2Q14188 446 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 OASLQ15646 514 aaKnown RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 BSPRYQ5W0U4 402 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 KCNT2Q6UVM3 1135 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 ATAD1Q8NBU5 361 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 SLC35B2Q8TB61 432 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 IL23AQ9NPF7 189 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 PIGVQ9NUD9 493 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 GRHL1Q9NZI5 618 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 DRG1Q9Y295 367 aaKnown RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 NEU2Q9Y3R4 380 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 MTMR11A4FU01 709 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 RPL21P46778 160 aaKnown RBP18.21■□□□□ 0.51
MBD4-202ENST00000393278 ARPP19P56211 112 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 OTUD4Q01804 1114 aaKnown RBP18.21■□□□□ 0.51
MBD4-202ENST00000393278 USP41Q3LFD5 358 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 FAM117BQ6P1L5 589 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 CMTR2Q8IYT2 770 aaKnown RBP18.21■□□□□ 0.51
MBD4-202ENST00000393278 SPPL2BQ8TCT7 592 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 VN1R3Q9BXE9 311 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 DHX35Q9H5Z1 703 aaKnown RBP18.21■□□□□ 0.51
MBD4-202ENST00000393278 VIPAS39Q9H9C1 493 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 MTMR10Q9NXD2 777 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 FAM53CQ9NYF3 392 aa18.21■□□□□ 0.51
MBD4-202ENST00000393278 GPR15P49685 360 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 NME3Q13232 169 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 DDR2Q16832 855 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 ANKRD20A8PQ5CZ79 823 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 PPP6R3Q5H9R7 873 aaPredicted RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 SPOUT1Q5T280 376 aaKnown RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 PRSS55Q6UWB4 352 aaPredicted RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 NUP93Q8N1F7 819 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 TTC9BQ8N6N2 239 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 EDEM1Q92611 657 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 ZNF558Q96NG5 402 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 WDR6Q9NNW5 1121 aaKnown RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 ZDHHC18Q9NUE0 388 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 SAE1Q9UBE0 346 aaPredicted RBP18.2■□□□□ 0.5
MBD4-202ENST00000393278 MTRRQ9UBK8 725 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 ZNF148Q9UQR1 794 aa18.2■□□□□ 0.5
MBD4-202ENST00000393278 SYNJ2BP-COX16A0A087WUM0 186 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 ITGAVP06756 1048 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 EN2P19622 333 aaPredicted RBP18.19■□□□□ 0.5
MBD4-202ENST00000393278 YWHAGP61981 247 aaKnown RBP eCLIP18.19■□□□□ 0.5
MBD4-202ENST00000393278 IFRD2Q12894 506 aaPredicted RBP18.19■□□□□ 0.5
MBD4-202ENST00000393278 BTG3Q14201 252 aaPredicted RBP18.19■□□□□ 0.5
MBD4-202ENST00000393278 SLC9A4Q6AI14 798 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 ZDHHC24Q6UX98 284 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 RNF19BQ6ZMZ0 732 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 ZNF365Q70YC5 407 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 SLC39A11Q8N1S5 342 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 MREGQ8N565 214 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 ALLCQ8N6M5 410 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 PQLC3Q8N755 202 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 PCDH19Q8TAB3 1148 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 ADAM32Q8TC27 787 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 C2orf15Q8WU43 125 aaKnown RBP18.19■□□□□ 0.5
MBD4-202ENST00000393278 PIK3R5Q8WYR1 880 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 MCOLN1Q9GZU1 580 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 COX16Q9P0S2 106 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 ASIC3Q9UHC3 531 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 HPCAL4Q9UM19 191 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 BACE2Q9Y5Z0 518 aa18.19■□□□□ 0.5
MBD4-202ENST00000393278 VNN2O95498 520 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 F9P00740 461 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 PECAM1P16284 738 aaPredicted RBP18.18■□□□□ 0.5
MBD4-202ENST00000393278 LAG3P18627 525 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 AIF1P55008 147 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 NOMO1Q15155 1222 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 PSMD5Q16401 504 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 SDHAF4Q5VUM1 108 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 SLC8B1Q6J4K2 584 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 GSTA5Q7RTV2 222 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 CCDC89Q8N998 374 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 FBXO22Q8NEZ5 403 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 RIN2Q8WYP3 895 aaPredicted RBP18.18■□□□□ 0.5
MBD4-202ENST00000393278 NTAN1Q96AB6 310 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 MAGEB5Q9BZ81 275 aa18.18■□□□□ 0.5
MBD4-202ENST00000393278 FAM129AQ9BZQ8 928 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms