RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 C12orf29Q8N999 325 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 MS4A14Q96JA4 679 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 C11orf70Q9BRQ4 267 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 ARL5CA6NH57 179 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 TLR3O15455 904 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 ARPC4P59998 168 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 CAMK2BQ13554 666 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 TRADDQ15628 312 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 SOWAHAQ2M3V2 549 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 MON1BQ7L1V2 547 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 DPH6Q7L8W6 267 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 PEX5LQ8IYB4 626 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 DQX1Q8TE96 717 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 TUBGCP5Q96RT8 1024 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 NUP85Q9BW27 656 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 NSRP1Q9H0G5 558 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 CCDC134Q9H6E4 229 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 RNF14Q9UBS8 474 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 CYTH4Q9UIA0 394 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 KIAA0100Q14667 2235 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 GJB6O95452 261 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 RPLP2P05387 115 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 CHN1P15882 459 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 VHLP40337 213 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 NSFP46459 744 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 SCNN1GP51170 649 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 ATN1P54259 1190 aaPredicted RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 OCRLQ01968 901 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 PTP4A2Q12974 167 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 DENND1BQ6P3S1 775 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 NT5DC3Q86UY8 548 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 PDCD7Q8N8D1 485 aaKnown RBP19.74■□□□□ 0.75
CCDC50-202ENST00000392456 TMEM176AQ96HP8 235 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 PAAF1Q9BRP4 392 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 CENPKQ9BS16 269 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 CYP3A43Q9HB55 503 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 FAM114A2Q9NRY5 505 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 TBCCD1Q9NVR7 557 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 GTF3C4Q9UKN8 822 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 STXBP5LQ9Y2K9 1186 aa19.74■□□□□ 0.75
CCDC50-202ENST00000392456 PDCD11Q14690 1871 aaKnown RBP19.73■□□□□ 0.75
CCDC50-202ENST00000392456 SART1O43290 800 aaKnown RBP19.73■□□□□ 0.75
CCDC50-202ENST00000392456 VDRP11473 427 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 FLT3P36888 993 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 HALP42357 657 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 INCA1Q0VD86 236 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 GPNMBQ14956 572 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 FAM126BQ8IXS8 530 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 LRRC52Q8N7C0 313 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 NACC2Q96BF6 587 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 TJP2Q9UDY2 1190 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 A0A0U1RQF3 1178 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 P4HA1P13674 534 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 KPNB1Q14974 876 aaKnown RBP19.73■□□□□ 0.75
CCDC50-202ENST00000392456 TMEM259Q4ZIN3 620 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 MRPL10Q7Z7H8 261 aaKnown RBP19.73■□□□□ 0.75
CCDC50-202ENST00000392456 SPATA24Q86W54 205 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 RHOT2Q8IXI1 618 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 USP33Q8TEY7 942 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 NAT14Q8WUY8 206 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 LRRC45Q96CN5 670 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 RETREG1Q9H6L5 497 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 RABL2AQ9UBK7 228 aaPredicted RBP19.73■□□□□ 0.75
CCDC50-202ENST00000392456 OGDHLQ9ULD0 1010 aa19.73■□□□□ 0.75
CCDC50-202ENST00000392456 USP15Q9Y4E8 981 aaPredicted RBP19.73■□□□□ 0.75
CCDC50-202ENST00000392456 TPPPO94811 219 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 ASMTLO95671 621 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 NAT2P11245 290 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 FGFR1P11362 822 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 VAV1P15498 845 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 CYP3A5P20815 502 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 MNX1P50219 401 aaPredicted RBP19.72■□□□□ 0.75
CCDC50-202ENST00000392456 PDE1BQ01064 536 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 C3orf62Q6ZUJ4 267 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 EIF1ADQ8N9N8 165 aaKnown RBP19.72■□□□□ 0.75
CCDC50-202ENST00000392456 CFAP61Q8NHU2 1237 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 HEXIM2Q96MH2 286 aaKnown RBP19.72■□□□□ 0.75
CCDC50-202ENST00000392456 ZNF711Q9Y462 761 aa19.72■□□□□ 0.75
CCDC50-202ENST00000392456 KPNA7A9QM74 516 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 CD4P01730 458 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 GSTT2P0CG29 244 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 GSTT2BP0CG30 244 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 MYCLP1P12525 358 aaPredicted RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 LILRA4P59901 499 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 RNASE9P60153 205 aaKnown RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 YWHAEP62258 255 aaKnown RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 MESDQ14696 234 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 GSTA3Q16772 222 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 PEX26Q7Z412 305 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 C14orf80Q86SX3 495 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 ZC3H18Q86VM9 953 aaKnown RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 DNAJC5GQ8N7S2 189 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 ZNF564Q8TBZ8 553 aaPredicted RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 LINC01599Q8WXQ3 324 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 HNRNPABQ99729 332 aaKnown RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 ALG6Q9Y672 507 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 TET1Q8NFU7 2136 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 MAGEB3O15480 346 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 PQBP1O60828 265 aaKnown RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 ZNF623O75123 536 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms