RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ELK3P41970 407 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 RABGGTBP53611 331 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 BCAR1P56945 870 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 RNASELQ05823 741 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 BST2Q10589 180 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PDK2Q15119 407 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC1A5Q15758 541 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM47EQ6ZV65 393 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MAP7D3Q8IWC1 876 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PALM2Q8IXS6 379 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PDIK1LQ8N165 341 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PYROXD2Q8N2H3 581 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC185Q8N715 623 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ATP11CQ8NB49 1132 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TEKT4Q8WW24 435 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PAFAH2Q99487 392 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 NSRP1Q9H0G5 558 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MTMR10Q9NXD2 777 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PSMC3IPQ9P2W1 217 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 HTTP42858 3142 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MDM4O15151 490 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TYROBPO43914 113 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 KRT4P19013 534 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ACAT1P24752 427 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CYP2F1P24903 491 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 LILRA4P59901 499 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 PITX1P78337 314 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 GBE1Q04446 702 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 XKR4Q5GH76 650 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC26A9Q7LBE3 791 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TRPM8Q7Z2W7 1104 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 NETO2Q8NC67 525 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 APPL2Q8NEU8 664 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC110Q8TBZ0 833 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 MZB1Q8WU39 189 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 CENPIQ92674 756 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 FAF2Q96CS3 445 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 TBCBQ99426 244 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 KLF6Q99612 283 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SNX25Q9H3E2 840 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 DHX35Q9H5Z1 703 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 ACSS3Q9H6R3 686 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 NRDE2Q9H7Z3 1164 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 GDAP2Q9NXN4 497 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC24A2Q9UI40 661 aa8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 USP15Q9Y4E8 981 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-204ENST00000380176 KBTBD13C9JR72 458 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 GOLGA8RI6L899 631 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PTGESO14684 152 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 NDC80O14777 642 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PRPF4O43172 522 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 CD4P01730 458 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 KCNE1P15382 129 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 AXLP30530 894 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PTPN9P43378 593 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 TAF6P49848 677 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 BCAT1P54687 386 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 HUNKP57058 714 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 MGAT5Q09328 741 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM133BQ5BKY9 247 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 ADGRD1Q6QNK2 874 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PPP1R21Q6ZMI0 780 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 LIMS2Q7Z4I7 341 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM228AQ86W67 206 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 DCAKDQ8WVC6 231 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 USP6NLQ92738 828 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 THOC1Q96FV9 657 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 SMC6Q96SB8 1091 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 DHRS4Q9BTZ2 278 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 SLCO1B3Q9NPD5 702 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 ETNK2Q9NVF9 386 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.094e-8■■■■□ 25.7
PDLIM5-204ENST00000380176 TEX264Q9Y6I9 313 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 TCRBV9S1A1TA0A576 114 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 HGSO14964 777 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 TGM2P21980 687 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 CA4P22748 312 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 HNRNPH1P31943 449 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PHBP35232 272 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 RPL34P49207 117 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 NDUFV1P49821 464 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 CRYBB1P53674 252 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 NR1H3Q13133 447 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 DNAJC3Q13217 504 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PCBP1Q15365 356 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 TAF1CQ15572 869 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 TWF2Q6IBS0 349 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PAQR9Q6ZVX9 377 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 SPATA21Q7Z572 469 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PRPF39Q86UA1 669 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 PIGZQ86VD9 579 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 ZDHHC17Q8IUH5 632 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 ADGRF2Q8IZF7 708 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 FUKQ8N0W3 1084 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
PDLIM5-204ENST00000380176 RMDN2Q96LZ7 410 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms