RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NUDCD1Q96RS6 583 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 RAD18Q9NS91 495 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PPME1Q9Y570 386 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 LACTBL1A8MY62 500 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 H3BM21 787 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PITPNM1O00562 1244 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ENPP3O14638 875 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 CXCR2P25025 360 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PBX2P40425 430 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 RPIAP49247 311 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PPP1R2P3Q6NXS1 205 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 FAM129CQ86XR2 697 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 OR2W6PQ8NHA6 318 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 FAM3CQ92520 227 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 CXorf40BQ96DE9 158 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 TOX2Q96NM4 488 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 MAGEB5Q9BZ81 275 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 KLHL11Q9NVR0 708 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 SCAMP1O15126 338 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 TLR5O60602 858 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 GMNNO75496 209 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 MTA2O94776 668 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 RPL9P32969 192 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 CARSP49589 748 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 WDR5P61964 334 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 LRRC63Q05C16 580 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 SNX1Q13596 522 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PAPD7Q5XG87 772 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 WDR93Q6P2C0 686 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 C4orf32Q8N8J7 132 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ZNF507Q8TCN5 953 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 LGMNQ99538 433 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 INTS2Q9H0H0 1204 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ZCWPW1Q9H0M4 648 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ADAMTS10Q9H324 1103 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 EBF3Q9H4W6 596 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 COG4Q9H9E3 785 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 DNMT3LQ9UJW3 386 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 A6NCN8 305 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 GEMIN4P57678 1058 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 BASP1P80723 227 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 MXRA7P84157 204 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 GAD2Q05329 585 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ORC2Q13416 577 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PDIA5Q14554 519 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 GRIN2CQ14957 1233 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PDGFRLQ15198 375 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 INSCQ1MX18 579 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 TAOK1Q7L7X3 1001 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PID1Q7Z2X4 250 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 KCNK18Q7Z418 384 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 CCDC13Q8IYE1 715 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 CCDC110Q8TBZ0 833 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 SLC22A17Q8WUG5 538 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ARMC5Q96C12 935 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 CCT8L2Q96SF2 557 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 NAP1L3Q99457 506 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 ACE2Q9BYF1 805 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PCMTD2Q9NV79 361 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PCDH10Q9P2E7 1040 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 MTRF1LQ9UGC7 380 aaKnown RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PHF24Q9UPV7 400 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 AHCTF1Q8WYP5 2266 aa6.77□□□□□ -1.32
NEDD9-202ENST00000379446 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CACNB4O00305 520 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 IFRD1O00458 451 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 FFAR2O15552 330 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PRMT3O60678 531 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 RFPL2O75678 378 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CALB1P05937 261 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CHRM1P11229 460 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CTNNA1P35221 906 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SMAD1Q15797 465 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 EDRF1Q3B7T1 1238 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF792Q3KQV3 632 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CAPRIN2Q6IMN6 1127 aaKnown RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 GPR135Q8IZ08 494 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ARFGAP2Q8N6H7 521 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 ANKS4BQ8N8V4 417 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SGSM3Q96HU1 749 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PRRX2Q99811 253 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 C2orf49Q9BVC5 232 aaPredicted RBP6.77□□□□□ -1.33
NEDD9-202ENST00000379446 PACSIN1Q9BY11 444 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SLC13A1Q9BZW2 595 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 RIOX1Q9H6W3 641 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 DNAJC28Q9NX36 388 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 APPL1Q9UKG1 709 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 DNAJC16Q9Y2G8 782 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 L3MBTL1Q9Y468 752 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 FAM86B1E9PN63 330 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 TBL1XO60907 577 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 SERPING1P05155 500 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 FAM86B2P0C5J1 330 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 OR1E1P30953 314 aa6.77□□□□□ -1.33
NEDD9-202ENST00000379446 RAP1GAPP47736 663 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms