RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 TBC1D13Q9NVG8 400 aa19.55■□□□□ 0.72
TBC1D4-201ENST00000377625 PADI4Q9UM07 663 aa19.55■□□□□ 0.72
TBC1D4-201ENST00000377625 RGS5O15539 181 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 GUCA1AP43080 201 aaPredicted RBP19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ELOVL6Q9H5J4 265 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 NOD2Q9HC29 1040 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 DDX43Q9NXZ2 648 aaKnown RBP19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 CYP39A1Q9NYL5 469 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 NCKIPSDQ9NZQ3 722 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 CPA4Q9UI42 421 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 KANSL1LA0AUZ9 987 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 AKAP3O75969 853 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ZNF682O95780 498 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 PEX5P50542 639 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 EZH2Q15910 746 aaKnown RBP19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 CPA3P15088 417 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 FGD2Q7Z6J4 655 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 TLR8Q9NR97 1041 aaKnown RBP19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ITGA11Q9UKX5 1188 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ALDH2P05091 517 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ERVK-10P10266 1014 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 DNAJB2P25686 324 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ITIH4Q14624 930 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 CCNG2Q16589 344 aa19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 ZNF571Q7Z3V5 609 aaPredicted RBP19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 PPP1R10Q96QC0 940 aaKnown RBP19.54■□□□□ 0.72
TBC1D4-201ENST00000377625 SLCO1B7G3V0H7 640 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 CSDE1O75534 798 aaKnown RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 PRLRP16471 622 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 FIGNQ5HY92 759 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 SCUBE1Q8IWY4 988 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 EHD4Q9H223 541 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 SNTG2Q9NY99 539 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 VANGL2Q9ULK5 521 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 CKBP12277 381 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 ATP6V1B2P21281 511 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 KCNMA1Q12791 1236 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 INTS5Q6P9B9 1019 aaKnown RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 LUZP2Q86TE4 346 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 TDRD5Q8NAT2 981 aaKnown RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 RTFDC1Q9BY42 306 aaPredicted RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 DMAP1Q9NPF5 467 aaPredicted RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 SETD4Q9NVD3 440 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 H3BRB1 525 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 IFNA14P01570 189 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 GSTM1P09488 218 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 MYL4P12829 197 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 ITGA9Q13797 1035 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 SYTL5Q8TDW5 730 aaPredicted RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 VMP1Q96GC9 406 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 TUT1Q9H6E5 874 aaKnown RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 E9PBE3 544 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 NCAM2O15394 837 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 KLHL41O60662 606 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 TOB1P50616 345 aaPredicted RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 SOX10P56693 466 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 SV2AQ7L0J3 742 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 PDCD2LQ9BRP1 358 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 TMBIM4Q9HC24 238 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 RBM22Q9NW64 420 aaKnown RBP eCLIP19.53■□□□□ 0.721e-8■■■■□ 25.3
TBC1D4-201ENST00000377625 A0A0A6YYK5 440 aaPredicted RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 ERI2A8K979 691 aaKnown RBP19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 STARD3Q14849 445 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 TMC7Q7Z402 723 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 RERGLQ9H628 205 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 ACTR8Q9H981 624 aa19.53■□□□□ 0.72
TBC1D4-201ENST00000377625 USP39Q53GS9 565 aaKnown RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 C9orf131Q5VYM1 1079 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 NT5DC3Q86UY8 548 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 LPCAT1Q8NF37 534 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 NFKBIZQ9BYH8 718 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 UTP6Q9NYH9 597 aaKnown RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 EPHX2P34913 555 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 DEFB128Q7Z7B8 93 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 MTERF3Q96E29 417 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 SYT15Q9BQS2 421 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 TIMM13Q9Y5L4 95 aaPredicted RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 NKRFO15226 690 aaKnown RBP eCLIP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 PYGMP11217 842 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 GRK2P25098 689 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 CCR1P32246 355 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 CCNG1P51959 295 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 ELAVL2Q12926 359 aaKnown RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 ERMARDQ5T6L9 678 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 ITIH5Q86UX2 942 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 FBXO25Q8TCJ0 367 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 MAGEB10Q96LZ2 347 aaPredicted RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 ACOX2Q99424 681 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 SH3GL1Q99961 368 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 GBA2Q9HCG7 927 aaPredicted RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 SPTLC1O15269 473 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 KIF1CO43896 1103 aaKnown RBP19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 TPBGLP0DKB5 382 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 HERVK_113P62684 666 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 MARC1Q5VT66 337 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 EDEM1Q92611 657 aa19.52■□□□□ 0.72
TBC1D4-201ENST00000377625 TMEM120AQ9BXJ8 343 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms