RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 HTR3DQ70Z44 454 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 SYT12Q8IV01 421 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 ZNF513Q8N8E2 541 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-204ENST00000377349 KCNV2Q8TDN2 545 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 TAS1R2Q8TE23 839 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 TAF4BQ92750 862 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 SPACA7Q96KW9 195 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 TWNKQ96RR1 684 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 CYLDQ9NQC7 956 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 BCCIPQ9P287 314 aaKnown RBP eCLIP20.22■□□□□ 0.83
CBWD3-204ENST00000377349 DEC1Q9P2X7 70 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 STARD13Q9Y3M8 1113 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 A0A1W2PQF6 199 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 TOP3BO95985 862 aaKnown RBP20.21■□□□□ 0.83
CBWD3-204ENST00000377349 CEACAM1P13688 526 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 MAP3K7CLP57077 242 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 PPP3CAQ08209 521 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 ANO4Q32M45 955 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 DCAF17Q5H9S7 520 aaPredicted RBP20.21■□□□□ 0.83
CBWD3-204ENST00000377349 SPDYCQ5MJ68 293 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 TCERG1LQ5VWI1 586 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 FMR1NBQ8N0W7 255 aaPredicted RBP20.21■□□□□ 0.83
CBWD3-204ENST00000377349 P2RY11Q96G91 374 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 NACA2Q9H009 215 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 PILRBQ9UKJ0 227 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 CIZ1Q9ULV3 898 aaPredicted RBP20.21■□□□□ 0.83
CBWD3-204ENST00000377349 DSPP15924 2871 aaKnown RBP20.21■□□□□ 0.83
CBWD3-204ENST00000377349 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
CBWD3-204ENST00000377349 NUMA1Q14980 2115 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 CABIN1Q9Y6J0 2220 aa20.21■□□□□ 0.83
CBWD3-204ENST00000377349 C1QTNF9BB2RNN3 333 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 SMC2O95347 1197 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 PROS1P07225 676 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 C1QTNF9P0C862 333 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 EPB41P11171 864 aaKnown RBP20.2■□□□□ 0.82
CBWD3-204ENST00000377349 ITPKAP23677 461 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 C10orf76Q5T2E6 689 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 BTBD8Q5XKL5 378 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 EGFLAMQ63HQ2 1017 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 ISM2Q6H9L7 571 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 SLC23A3Q6PIS1 610 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 CLEC20AQ6ZU45 233 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 UNC93AQ86WB7 457 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 SMARCE1Q969G3 411 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 ACOX2Q99424 681 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 TSG101Q99816 390 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 FBXO44Q9H4M3 255 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 NMUR1Q9HB89 426 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 LAMA5O15230 3695 aa20.2■□□□□ 0.82
CBWD3-204ENST00000377349 CETN3O15182 167 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 MAPK13O15264 365 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 CYP26A1O43174 497 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 MAP3K13O43283 966 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 CACNG3O60359 315 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 SPINK2P20155 84 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 INCA1Q0VD86 236 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 FOXC1Q12948 553 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 LYSMD4Q5XG99 296 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 DEFB124Q8NES8 71 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 APOBEC3GQ9HC16 384 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 TLR8Q9NR97 1041 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 MARK1Q9P0L2 795 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 CALCOCO1Q9P1Z2 691 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 HOOK1Q9UJC3 728 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 SCML2Q9UQR0 700 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 ANKRD11Q6UB99 2663 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 PRRT4C9JH25 899 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 FAM200BP0CF97 657 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 HOXB2P14652 356 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 ENGP17813 658 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 WASP42768 502 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 PRCPP42785 496 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 MXI1P50539 228 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 LMAN2Q12907 356 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 BYSLQ13895 437 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 NFIL3Q16649 462 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 UAP1L1Q3KQV9 507 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 ZNF394Q53GI3 561 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 KIAA1211LQ6NV74 962 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 UNQ6494/PRO21346Q6UXR6 183 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 TOGARAM2Q6ZUX3 1019 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 TRMT11Q7Z4G4 463 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 PGBD3Q8N328 593 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 HNRNPABQ99729 332 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 TMEM8AQ9HCN3 771 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 FSCN3Q9NQT6 498 aa20.19■□□□□ 0.82
CBWD3-204ENST00000377349 DNAJC17Q9NVM6 304 aaKnown RBP20.19■□□□□ 0.82
CBWD3-204ENST00000377349 IGHV1OR15-9A0A0B4J2B8 117 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 NEDD8-MDP1E9PL57 170 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 TYRP14679 529 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 NTSR1P30989 418 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 EDRF1Q3B7T1 1238 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 PREPLQ4J6C6 727 aaPredicted RBP20.18■□□□□ 0.82
CBWD3-204ENST00000377349 ZCWPW2Q504Y3 356 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 ZNF658Q5TYW1 1059 aaPredicted RBP20.18■□□□□ 0.82
CBWD3-204ENST00000377349 KRT39Q6A163 491 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 GRAMD4Q6IC98 578 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 Q6ZNB5 142 aa20.18■□□□□ 0.82
CBWD3-204ENST00000377349 PIP4P1Q86T03 277 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms