RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 UCMAQ8WVF2 138 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 TCEAL3Q969E4 200 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 TSG101Q99816 390 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 DUSP16Q9BY84 665 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 UBXN6Q9BZV1 441 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 SLC32A1Q9H598 525 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 HMGXB4Q9UGU5 601 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 HOOK1Q9UJC3 728 aaKnown RBP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 NAGPAQ9UK23 515 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 INVSQ9Y283 1065 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 EML5Q05BV3 1969 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 CNOT1A5YKK6 2376 aaKnown RBP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 CYP26A1O43174 497 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 ADAM23O75077 832 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 CYBBP04839 570 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 TRIM49P0CI25 452 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 TRIM49CP0CI26 452 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 CEACAM1P13688 526 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 CD58P19256 250 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 ORC1Q13415 861 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 STARD3Q14849 445 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 MAP7D1Q3KQU3 841 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 TRIM61Q5EBN2 209 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 C1orf220Q5T0J3 134 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 PSAPL1Q6NUJ1 521 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 JAKMIP2Q96AA8 810 aa15.52■□□□□ 0.08
HDAC6-204ENST00000376643 HEXIM2Q96MH2 286 aaKnown RBP15.52■□□□□ 0.08
HDAC6-204ENST00000376643 A0A1W2PQH9 124 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 GOLGA6L4A6NEF3 574 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 HHLA1C9JL84 531 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF202O95125 648 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-204ENST00000376643 RDXP35241 583 aaKnown RBP15.51■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF445P59923 1031 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 MCCD1P59942 119 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-204ENST00000376643 RPL6Q02878 288 aaKnown RBP15.51■□□□□ 0.07
HDAC6-204ENST00000376643 PPP3CAQ08209 521 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 DUOXA1Q1HG43 343 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 SLC23A3Q6PIS1 610 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 TPGS1Q6ZTW0 290 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 RSRC2Q7L4I2 434 aaKnown RBP15.51■□□□□ 0.07
HDAC6-204ENST00000376643 GABRG3Q99928 467 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 MMRN2Q9H8L6 949 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 APOBEC3GQ9HC16 384 aaKnown RBP15.51■□□□□ 0.07
HDAC6-204ENST00000376643 RAB20Q9NX57 234 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 SUSD2Q9UGT4 822 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 USP3Q9Y6I4 520 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 CACNA1BQ00975 2339 aa15.51■□□□□ 0.07
HDAC6-204ENST00000376643 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 SLC16A3O15427 465 aaKnown RBP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 GREM1O60565 184 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 SMC2O95347 1197 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 TBX18O95935 607 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 HNRNPLP14866 589 aaKnown RBP eCLIP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 GFPT1Q06210 699 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 EIF4HQ15056 248 aaKnown RBP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 ZCWPW2Q504Y3 356 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 SYCP2LQ5T4T6 812 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 PEAR1Q5VY43 1037 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 ARHGAP17Q68EM7 881 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 TMEFF1Q8IYR6 380 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 HDDC3Q8N4P3 179 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 IPO4Q8TEX9 1081 aaKnown RBP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 RLN3Q8WXF3 142 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 FOXJ1Q92949 421 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 TMEM176AQ96HP8 235 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 TWNKQ96RR1 684 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 CISHQ9NSE2 258 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 OLA1Q9NTK5 396 aaKnown RBP15.5■□□□□ 0.07
HDAC6-204ENST00000376643 CALCOCO1Q9P1Z2 691 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 HESX1Q9UBX0 185 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 SLC6A14Q9UN76 642 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 SLC27A6Q9Y2P4 619 aa15.5■□□□□ 0.07
HDAC6-204ENST00000376643 EPG5Q9HCE0 2579 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 NDUFS2O75306 463 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 SYPP08247 313 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 PRR29P0C7W0 189 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 GABRG2P18507 467 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 PPP1R2P41236 205 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 IRX4P78413 519 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF252P-AS1Q0IIN9 211 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 MESP2Q0VG99 397 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 STIM1Q13586 685 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 HNRNPDQ14103 355 aaKnown RBP15.49■□□□□ 0.07
HDAC6-204ENST00000376643 COBLL1Q53SF7 1204 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 PPP1R26Q5T8A7 1209 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-204ENST00000376643 SH3PXD2AQ5TCZ1 1133 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 Q6ZNB5 142 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 MIB1Q86YT6 1006 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 SFTPA1Q8IWL2 248 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 ANKRD52Q8NB46 1076 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 ELMO3Q96BJ8 720 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 GSDMAQ96QA5 445 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 RASAL2Q9UJF2 1139 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 PILRBQ9UKJ0 227 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 MYH10P35580 1976 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms