RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SHCBP1LQ9BZQ2 653 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 MAP10Q9P2G4 905 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 PRKAG3Q9UGI9 489 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 PLA2G4CQ9UP65 541 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TPRP12270 2363 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 SUPT7LO94864 414 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 ZBTB7AO95365 584 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 PABPC1P11940 636 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 ITGALP20701 1170 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 STRA8Q7Z7C7 330 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 PPIEQ9UNP9 301 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 LOC100653049A0A140TA62 436 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 GEMP55040 296 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 DRG1Q9Y295 367 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 RHOBTB3O94955 611 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 BCL10O95999 233 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 IFNGR2P38484 337 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 PDK2Q15119 407 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 NAT9Q9BTE0 207 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TBX20Q9UMR3 447 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 RBP3P10745 1247 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TAF6P49848 677 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TMEM79Q9BSE2 394 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TMA7Q9Y2S6 64 aaKnown RBP12.82□□□□□ -0.36
VPS13A-204ENST00000376634 H3BMM5 538 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 TGFBR2P37173 567 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 REPS1Q96D71 796 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 CHST12Q9NRB3 414 aa12.82□□□□□ -0.36
VPS13A-204ENST00000376634 GLRA3O75311 464 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CKMP06732 381 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 ABCB1P08183 1280 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 WARSP23381 471 aaKnown RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 RAD23AP54725 363 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 DNAJC3Q13217 504 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 PLD1Q13393 1074 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 SGF29Q96ES7 293 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 STARD13Q9Y3M8 1113 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 FER1L6Q2WGJ9 1857 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 C17orf102A2RUQ5 167 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CYP7B1O75881 506 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 ZSWIM7Q19AV6 140 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 SYN2Q92777 582 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CHP1Q99653 195 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 VANGL2Q9ULK5 521 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 PUDPQ08623 228 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CUL2Q13617 745 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 OASLQ15646 514 aaKnown RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 MTSS1LQ765P7 747 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 STX12Q86Y82 276 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CAMKK1Q8N5S9 505 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 SH2D3AQ9BRG2 576 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 VPS51Q9UID3 782 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 MEI4A8MW99 385 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 SMNDC1O75940 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 RPN2P04844 631 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 AKAP5P24588 427 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 NUDT14O95848 222 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 ITGB3P05106 788 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 RBP1P09455 135 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 GLRBP48167 497 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 SLC29A2Q14542 456 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 SLFN11Q7Z7L1 901 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 UBA3Q8TBC4 463 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 NOD2Q9HC29 1040 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 STAG3L1P0CL83 205 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 MBL2P11226 248 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 STARD3Q14849 445 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CATSPER2Q96P56 530 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 NCKIPSDQ9NZQ3 722 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 ZNF624Q9P2J8 865 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 KPNA4O00629 521 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 MSH3P20585 1137 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 PAICSP22234 425 aaKnown RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 USP38Q8NB14 1042 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 NACC2Q96BF6 587 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CELF4Q9BZC1 486 aaKnown RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CHORDC1Q9UHD1 332 aaPredicted RBP12.81□□□□□ -0.36
VPS13A-204ENST00000376634 CCDC189A1A4V9 331 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 BOLA3Q53S33 107 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 USP18Q9UMW8 372 aa12.81□□□□□ -0.36
VPS13A-204ENST00000376634 M0QYT0 321 aa12.8□□□□□ -0.36
VPS13A-204ENST00000376634 ZNF157P51786 506 aaPredicted RBP12.8□□□□□ -0.36
VPS13A-204ENST00000376634 BCAT1P54687 386 aa12.8□□□□□ -0.36
VPS13A-204ENST00000376634 AMPD2Q01433 879 aa12.8□□□□□ -0.36
VPS13A-204ENST00000376634 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
VPS13A-204ENST00000376634 CCNJLQ8IV13 435 aa12.8□□□□□ -0.36
VPS13A-204ENST00000376634 KLF6Q99612 283 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms