RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 CNTN3Q9P232 1028 aa12.71□□□□□ -0.38
UBR4-203ENST00000375225 SAE1Q9UBE0 346 aaPredicted RBP12.71□□□□□ -0.38
UBR4-203ENST00000375225 A8MXQ7 604 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 PGK1P00558 417 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 NEFHP12036 1026 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 CCND3P30281 292 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 SSTR1P30872 391 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 RPA3P35244 121 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 MAGEA6P43360 314 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 ATP11AP98196 1134 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 CAP1Q01518 475 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 SV2CQ496J9 727 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 CCDC14Q49A88 953 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 EFHC1Q5JVL4 640 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 HP1BP3Q5SSJ5 553 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 PPP1R26Q5T8A7 1209 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 TTC39BQ5VTQ0 682 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 ANKRD22Q5VYY1 191 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 LVRNQ6Q4G3 990 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 SLC26A9Q7LBE3 791 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 PLD5Q8N7P1 536 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 PCSK9Q8NBP7 692 aaKnown RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 SLC35F5Q8WV83 523 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 PEBP4Q96S96 227 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 PCDH18Q9HCL0 1135 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 RAB6BQ9NRW1 208 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 RCOR3Q9P2K3 495 aaPredicted RBP12.7□□□□□ -0.38
UBR4-203ENST00000375225 ZNF180Q9UJW8 692 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 CHMP2BQ9UQN3 213 aa12.7□□□□□ -0.38
UBR4-203ENST00000375225 SCN10AQ9Y5Y9 1956 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 MYADML2A6NDP7 307 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 LPXNO60711 386 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 ADAMTS4O75173 837 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 TMEM63AO94886 807 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 TPSB2P20231 275 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 CYP3A5P20815 502 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 CNTFP26441 200 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
UBR4-203ENST00000375225 FOXN2P32314 431 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 FDFT1P37268 417 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 ARL4AP40617 200 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 ELK3P41970 407 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 RGS7P49802 495 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 SERPINB9P50453 376 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 NCALDP61601 193 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 CDK16Q00536 496 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 ADCY1Q08828 1119 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 DNAJC3Q13217 504 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 PTK7Q13308 1070 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 C15orf59Q2T9L4 293 aaPredicted RBP12.69□□□□□ -0.38
UBR4-203ENST00000375225 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 STRADAQ7RTN6 431 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 RNF180Q86T96 592 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 TBC1D1Q86TI0 1168 aaPredicted RBP12.69□□□□□ -0.38
UBR4-203ENST00000375225 ACOT1Q86TX2 421 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 SLC26A11Q86WA9 606 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 AGGF1Q8N302 714 aaeCLIP12.69□□□□□ -0.38
UBR4-203ENST00000375225 DCAKDQ8WVC6 231 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 SLC44A1Q8WWI5 657 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 ZNF75CPQ92670 426 aaPredicted RBP12.69□□□□□ -0.38
UBR4-203ENST00000375225 APOPT1Q96IL0 206 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
UBR4-203ENST00000375225 XAB2Q9HCS7 855 aaKnown RBP12.69□□□□□ -0.38
UBR4-203ENST00000375225 SNTG2Q9NY99 539 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 TEX264Q9Y6I9 313 aa12.69□□□□□ -0.38
UBR4-203ENST00000375225 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
UBR4-203ENST00000375225 KRT38O76015 456 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 UNC5CO95185 931 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 RPLP2P05387 115 aaKnown RBP12.68□□□□□ -0.38
UBR4-203ENST00000375225 PFKMP08237 780 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 CCNB1P14635 433 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 TAF6P49848 677 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 ZBTB6Q15916 424 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 DPYSL2Q16555 572 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 FBXO47Q5MNV8 452 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 C9orf57Q5W0N0 161 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 PMF1Q6P1K2 205 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 TAF2Q6P1X5 1199 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 CCNJLQ8IV13 435 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 CRYBG2Q8N1P7 616 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 NME8Q8N427 588 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 BANPQ8N9N5 519 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 APPL2Q8NEU8 664 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 INPP5DQ92835 1189 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 MRRFQ96E11 262 aaKnown RBP12.68□□□□□ -0.38
UBR4-203ENST00000375225 ADAMTS10Q9H324 1103 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms