RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 EPN3Q9H201 632 aa20.37■□□□□ 0.85
HDAC1-201ENST00000373548 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.37■□□□□ 0.85
HDAC1-201ENST00000373548 ZNF638Q14966 1978 aaKnown RBP20.37■□□□□ 0.85
HDAC1-201ENST00000373548 TCRBV7S3A2A0A539 114 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 TMEM63AO94886 807 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 MAP3K6O95382 1288 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 CYP11A1P05108 521 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 PDIA2Q13087 525 aaKnown RBP20.36■□□□□ 0.85
HDAC1-201ENST00000373548 MBTPS1Q14703 1052 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 STAT4Q14765 748 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 HIF1AQ16665 826 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 CCDC38Q502W7 563 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 SYPL2Q5VXT5 272 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 HASPINQ8TF76 798 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 CSPG4P5Q96PW8 444 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 FZD10Q9ULW2 581 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 CEP350Q5VT06 3117 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.36■□□□□ 0.85
HDAC1-201ENST00000373548 BANF1O75531 89 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 FBXO21O94952 628 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 DAOAP59103 153 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 RAB41Q5JT25 222 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 LHX8Q68G74 356 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 RTN4RL1Q86UN2 441 aaPredicted RBP20.36■□□□□ 0.85
HDAC1-201ENST00000373548 EXOC3L1Q86VI1 746 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 ZBED8Q8IZ13 594 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 PYROXD2Q8N2H3 581 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 RTP4Q96DX8 246 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 SELENOSQ9BQE4 189 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 RHOBTB2Q9BYZ6 727 aa20.36■□□□□ 0.85
HDAC1-201ENST00000373548 CWC15Q9P013 229 aaKnown RBP20.36■□□□□ 0.85
HDAC1-201ENST00000373548 A0A087WUV0 522 aaPredicted RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 BCLAF3A2AJT9 711 aaKnown RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 SRRM3A6NNA2 597 aaPredicted RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 HHLA1C9JL84 531 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 M0QZQ0 153 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 INHAP05111 366 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 FYNP06241 537 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 RDXP35241 583 aaKnown RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 SEC24CP53992 1094 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 BASP1P80723 227 aaKnown RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 FNBP1LQ5T0N5 605 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 CCDC13Q8IYE1 715 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 MYLPFQ96A32 169 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 SMARCD1Q96GM5 515 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 TSEN34Q9BSV6 310 aaKnown RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 PHACTR1Q9C0D0 580 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 POPDC2Q9HBU9 364 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 STAP1Q9ULZ2 295 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 USP3Q9Y6I4 520 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 CFAP69A5D8W1 941 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 YJEFN3A6XGL0 299 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 E7ENQ6 273 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 M0QYT0 321 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 INPPL1O15357 1258 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 KCNN4O15554 427 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 ITGB1P05556 798 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 RBL1P28749 1068 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 ARL4CP56559 192 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 GBE1Q04446 702 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 SLC10A2Q12908 348 aaPredicted RBP20.35■□□□□ 0.85
HDAC1-201ENST00000373548 MSS51Q4VC12 460 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 FAM182AQ5T1J6 154 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 METTL23Q86XA0 190 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 RSPH1Q8WYR4 309 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 UROC1Q96N76 676 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 ACBD6Q9BR61 282 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 CCDC77Q9BR77 488 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 ZMYND15Q9H091 742 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 CNGB3Q9NQW8 809 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 RGS18Q9NS28 235 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 LGALS13Q9UHV8 139 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 NAALADL1Q9UQQ1 740 aa20.35■□□□□ 0.85
HDAC1-201ENST00000373548 A0A1W2PQ45 241 aaPredicted RBP20.34■□□□□ 0.85
HDAC1-201ENST00000373548 A0A1W2PQY0 241 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 C9IYK1 514 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 F8W810 466 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 SMAPO00193 183 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 ZBED1O96006 694 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 GOT1P17174 413 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 INTS6LQ5JSJ4 861 aaKnown RBP20.34■□□□□ 0.85
HDAC1-201ENST00000373548 FAM171BQ6P995 826 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 SLC43A3Q8NBI5 491 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 ARHGEF2Q92974 986 aaKnown RBP20.34■□□□□ 0.85
HDAC1-201ENST00000373548 CSNK1G1Q9HCP0 422 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 PPANQ9NQ55 473 aaKnown RBP20.34■□□□□ 0.85
HDAC1-201ENST00000373548 TMPRSS4Q9NRS4 437 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 EURLQ9NYK6 297 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 XPO7Q9UIA9 1087 aaKnown RBP20.34■□□□□ 0.85
HDAC1-201ENST00000373548 PTPRDP23468 1912 aa20.34■□□□□ 0.85
HDAC1-201ENST00000373548 SYNJ2BP-COX16A0A087WUM0 186 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 E7ESA3 106 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 CHN1P15882 459 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 ZFXP17010 805 aaPredicted RBP20.33■□□□□ 0.85
HDAC1-201ENST00000373548 AMPD1P23109 780 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 YY1P25490 414 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 TAOK1Q7L7X3 1001 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 CTU1Q7Z7A3 348 aaKnown RBP20.33■□□□□ 0.85
HDAC1-201ENST00000373548 ANKMY2Q8IV38 441 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 PSTKQ8IV42 348 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms