RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 NUP107P57740 925 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 PRKG1Q13976 671 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 GPR162Q16538 588 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 KNOP1Q1ED39 458 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 SFT2D3Q587I9 215 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 TMEM63BQ5T3F8 832 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 LMBRD2Q68DH5 695 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RAPH1Q70E73 1250 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 U2AF1L4Q8WU68 220 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 TRIM51Q9BSJ1 452 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 NUP85Q9BW27 656 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 PLVAPQ9BX97 442 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CELF4Q9BZC1 486 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 VPS33BQ9H267 617 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 SEMA4AQ9H3S1 761 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ARMC7Q9H6L4 198 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 MLXIPLQ9NP71 852 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 MAN1C1Q9NR34 630 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 PHTF1Q9UMS5 762 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RABGAP1Q9Y3P9 1069 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 FAM187AA6NFU0 413 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ALOX15BO15296 676 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 B4GALT4O60513 344 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 MAGEC1O60732 1142 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 PSMD10O75832 226 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 SLITRK3O94933 977 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 TFPTP0C1Z6 253 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 NR2F2P24468 414 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 GNALP38405 381 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CREB5Q02930 508 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 HSPA14Q0VDF9 509 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 APOFQ13790 326 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 DCAF6Q58WW2 860 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 LVRNQ6Q4G3 990 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 VPS52Q8N1B4 723 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 MARVELD2Q8N4S9 558 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 AGBL3Q8NEM8 1001 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 LILRB4Q8NHJ6 448 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF398Q8TD17 642 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 SYN2Q92777 582 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RHOVQ96L33 236 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 BTBD9Q96Q07 612 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 SLC6A16Q9GZN6 736 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF696Q9H7X3 374 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF304Q9HCX3 659 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 KCNK9Q9NPC2 374 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RSL24D1Q9UHA3 163 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 LZTS1Q9Y250 596 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 IFT52Q9Y366 437 aa9.17□□□□□ -0.94
ATG4A-203ENST00000372232 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
ATG4A-203ENST00000372232 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PDXKO00764 312 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CHEK2O96017 543 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ENO2P09104 434 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MUTP22033 750 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CDK9P50750 372 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 HNRNPFP52597 415 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 IL9RQ01113 521 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 DLG1Q12959 904 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CTTNQ14247 550 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 KRT81Q14533 505 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 KYNUQ16719 465 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 TRMT5Q32P41 509 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MMEL1Q495T6 779 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CEP55Q53EZ4 464 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 UBAP2Q5T6F2 1119 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 C1orf53Q5VUE5 145 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 RINT1Q6NUQ1 792 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SLC30A10Q6XR72 485 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SPATC1Q76KD6 591 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF438Q7Z4V0 828 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 LRRC6Q86X45 466 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MMAAQ8IVH4 418 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PCYOX1LQ8NBM8 494 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 HCAR2Q8TDS4 363 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ACTRT2Q8TDY3 377 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SLC5A5Q92911 643 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 LSM14BQ9BX40 385 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MRPL1Q9BYD6 325 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 GLIS2Q9BZE0 524 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 TUFT1Q9NNX1 390 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CNGB3Q9NQW8 809 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms